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SCNpilot_BF_INOC_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_42_1
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)
Type VI secretion system needle syringe protein TssI {ECO:0000313|EMBL:ACH40037.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;
SCNpilot_BF_INOC_scaffold_42_2
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(410..1126)
DNA (717bp) protein (239aa)
2OG-Fe(II) oxygenase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036294F9
Uncharacterized protein {ECO:0000313|EMBL:KFN43790.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_3
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1208..2314)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D9S3_COMTE
Uncharacterized protein {ECO:0000313|EMBL:KFN42812.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_4
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2452..3510)
DNA (1059bp) protein (353aa)
DNA-binding protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4F000
Uncharacterized protein {ECO:0000313|EMBL:KFN42813.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
DNA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_42_5
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3599..4627)
DNA (1029bp) protein (343aa)
fbp; fructose-1,6-bisphosphatase; K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
fructose-1,6-bisphosphatase (EC:3.1.3.11)
fructose-1 6-bisphosphatase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B45710
SCNpilot_BF_INOC_scaffold_42_6
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4842..7640
DNA (2799bp) protein (933aa)
Psychrophilic metalloprotease Fpp1 n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XRB5_FLAIG
Metalloprotease {ECO:0000313|EMBL:BAQ56327.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum
fpp1; Psychrophilic metalloprotease Fpp1 precursor
SCNpilot_BF_INOC_scaffold_42_7
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7841..8257
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003652173
Uncharacterized protein {ECO:0000313|EMBL:KJV10309.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8464..9153
DNA (690bp) protein (230aa)
DeoR faimly transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI00034AB99D
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:GAN45844.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source=
putative transcriptional regulator
SCNpilot_BF_INOC_scaffold_42_9
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9532..10761)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003811F3D
rlmI; 50S m5C1962 methyltransferase RlmI
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_42_10
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10771..11472
DNA (702bp) protein (234aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNC2_AZOSU
sugar fermentation stimulation protein
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source=
SCNpilot_BF_INOC_scaffold_42_11
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11600..12592)
DNA (993bp) protein (331aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
delta-aminolevulinic acid dehydratase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B7484E
delta-aminolevulinic acid dehydratase
SCNpilot_BF_INOC_scaffold_42_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12880..15438
DNA (2559bp) protein (853aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003778128
signal transduction protein containing a membrane domain an EAL and a GGDEF domain Tax=RBG_16_Gamma2_60_9_curated
signal transduction protein containing a membrane domain an EAL and a GGDEF domain
SCNpilot_BF_INOC_scaffold_42_13
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15431..16315
DNA (885bp) protein (295aa)
peptide ABC transporter permease n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B61F46
binding-protein-dependent transport system inner membrane protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
oligopeptide transporter permease protein
SCNpilot_BF_INOC_scaffold_42_14
Halomonas huangheensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16312..17925
DNA (1614bp) protein (538aa)
peptide ABC transporter ATPase n=1 Tax=Halomonas smyrnensis RepID=UPI0002FA1ABE
Uncharacterized protein {ECO:0000313|EMBL:ERL49716.1}; TaxID=1178482 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheen
ABC transporter-like protein
SCNpilot_BF_INOC_scaffold_42_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18078..18545
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EAA6D
Uncharacterized protein {ECO:0000313|EMBL:GAN45554.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18672..19301
DNA (630bp) protein (210aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
16S rRNA methyltransferase n=1 Tax=Dyella japonica RepID=UPI0002EC63D1
16S rRNA methyltransferase
SCNpilot_BF_INOC_scaffold_42_17

Not on your lists

19318..20109
DNA (792bp) protein (264aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=mine drainage metagenome RepID=T1C4M5_9ZZZZ
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:EQD75798.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
chromosome partitioning protein
SCNpilot_BF_INOC_scaffold_42_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20118..20993
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372ECF4
Chromosome partitioning protein ParB {ECO:0000313|EMBL:GAN45557.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="
chromosome partitioning protein ParB
SCNpilot_BF_INOC_scaffold_42_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21045..21557
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D4936
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
RNA polymerase sigma factor
SCNpilot_BF_INOC_scaffold_42_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21554..22276
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUG8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90859.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
SCNpilot_BF_INOC_scaffold_42_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22491..23210
DNA (720bp) protein (240aa)
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:CCP13812.1}; EC=2.4.1.83 {ECO:0000313|EMBL:CCP13812.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
dolichol-phosphate mannosyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F87472
family 2 glycosyl transferase
SCNpilot_BF_INOC_scaffold_42_22
unknown

Not on your lists

23525..24835
DNA (1311bp) protein (437aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_42_23
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24939..26639
DNA (1701bp) protein (567aa)
ggt3; gamma-glutamyltranspeptidase (EC:2.3.2.2)
Exported gamma-glutamyltranspeptidase {ECO:0000313|EMBL:CAP50218.1}; EC=2.3.2.2 {ECO:0000313|EMBL:CAP50218.1};; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
Exported gamma-glutamyltranspeptidase n=2 Tax=Xanthomonas campestris RepID=B0RP33_XANCB
SCNpilot_BF_INOC_scaffold_42_24
unknown

Not on your lists

26762..27889
DNA (1128bp) protein (376aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_42_25
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28035..28670
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035FA93F
Uncharacterized protein {ECO:0000313|EMBL:KFN44227.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
ParA family partition protein
SCNpilot_BF_INOC_scaffold_42_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28920..29390
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003616D3E
Phosphoglycerate mutase {ECO:0000313|EMBL:AKC86633.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
phosphoglycerate mutase
SCNpilot_BF_INOC_scaffold_42_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29405..29977
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000378E05C
Uncharacterized protein {ECO:0000313|EMBL:EIL86785.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29992..31815
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EDBE7
Phospholipase {ECO:0000313|EMBL:GAN45143.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimin
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
SCNpilot_BF_INOC_scaffold_42_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32168..32746
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000368A5EC
Uncharacterized protein {ECO:0000313|EMBL:GAN45144.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_30
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33094..34248)
DNA (1155bp) protein (385aa)
transporter n=1 Tax=Xanthomonas sacchari RepID=UPI000262A197
rdd domain containing protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
RDD domain-containing protein
Displaying items 1-30 of 181 in total

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