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SCNpilot_BF_INOC_scaffold_42

Search features with annotation key words

Displaying items 121-150 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_42_121
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158215..159699)
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hyl
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C7F8C
Sensory histidine kinase BaeS
SCNpilot_BF_INOC_scaffold_42_122
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160093..162105
DNA (2013bp) protein (671aa)
Amidohydrolase family protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FRM6_STIAD
amidohydrolase family protein
Amidohydrolase family protein {ECO:0000313|EMBL:ADO75803.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" sourc
SCNpilot_BF_INOC_scaffold_42_123
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162432..163331)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036058B0
xerC; site-specific tyrosine recombinase XerC
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_42_124
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163342..164025)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003618620
Uncharacterized protein {ECO:0000313|EMBL:KGI79208.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_125
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164022..164831)
DNA (810bp) protein (270aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
diaminopimelate epimerase (EC:5.1.1.7)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003733A4A
SCNpilot_BF_INOC_scaffold_42_126
unknown

Not on your lists

comp(164877..165005)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_42_127
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165103..165780
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI79179.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_128
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

166250..167092
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica SWK14 RepID=L7CB41_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:ELP31414.1}; TaxID=993516 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula bal
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_129
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167219..169450)
DNA (2232bp) protein (744aa)
C-terminal processing peptidase family protein (EC:3.4.21.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E7734
Peptidase S41 {ECO:0000313|EMBL:GAN45207.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimin
SCNpilot_BF_INOC_scaffold_42_130
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169478..170461)
DNA (984bp) protein (328aa)
lipA; lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
lipoyl synthase (EC:2.8.1.8)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000367012F
SCNpilot_BF_INOC_scaffold_42_131
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170467..171150)
DNA (684bp) protein (228aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAL4_9GAMM
lipoate-protein ligase B
SCNpilot_BF_INOC_scaffold_42_132
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171235..171525)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B90D8
Uncharacterized protein {ECO:0000313|EMBL:GAN45204.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_133
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171525..172781)
DNA (1257bp) protein (419aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFT7_9GAMM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:GAN45203.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="M
penicillin-binding protein 6
SCNpilot_BF_INOC_scaffold_42_134
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172959..173945)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037D3086
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AHX15729.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_42_135
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173942..174940)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EE3F5
Lytic murein transglycosylase {ECO:0000313|EMBL:GAN45202.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
lytic murein transglycosylase
SCNpilot_BF_INOC_scaffold_42_136
unknown

Not on your lists

comp(175050..175490)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_42_137
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175596..176708)
DNA (1113bp) protein (371aa)
rod shape-determining protein RodA n=1 Tax=Dyella ginsengisoli RepID=UPI00034DB2C7
Rod shape-determining protein RodA {ECO:0000313|EMBL:GAN45201.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mi
rod shape-determining protein RodA
SCNpilot_BF_INOC_scaffold_42_138
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176708..178663)
DNA (1956bp) protein (652aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN44_9GAMM
Penicillin-binding protein 2 {ECO:0000313|EMBL:GAN45200.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugaki
SCNpilot_BF_INOC_scaffold_42_139
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178660..179151)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371154D
Rod shape-determining protein MreD {ECO:0000313|EMBL:GAN45199.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mi
rod shape-determining protein MreD
SCNpilot_BF_INOC_scaffold_42_140
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179148..180239)
DNA (1092bp) protein (364aa)
Cell shape-determining protein MreC n=1 Tax=Rhodanobacter denitrificans RepID=I4WF10_9GAMM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
rod shape-determining protein MreC
SCNpilot_BF_INOC_scaffold_42_141
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180295..181341)
DNA (1047bp) protein (349aa)
Rod shape-determining protein MreB n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFE7_9GAMM
Rod shape-determining protein MreB {ECO:0000313|EMBL:EIL98188.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
rod shape-determining protein MreB
SCNpilot_BF_INOC_scaffold_42_142
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181631..181987
DNA (357bp) protein (119aa)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003719B9D
aspartyl/glutamyl-tRNA amidotransferase subunit C
SCNpilot_BF_INOC_scaffold_42_143
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181984..183432
DNA (1449bp) protein (483aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=477228
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003798CFD
SCNpilot_BF_INOC_scaffold_42_144
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183429..184892
DNA (1464bp) protein (488aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D8AF0
glutamyl-tRNA(Gln) amidotransferase subunit B
SCNpilot_BF_INOC_scaffold_42_145
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(185074..187341)
DNA (2268bp) protein (756aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
chromosome condensation regulator RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ACL23605.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae;
SCNpilot_BF_INOC_scaffold_42_146
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187435..188676)
DNA (1242bp) protein (414aa)
Fatty acid desaturase n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AHP3_PSEF1
fatty acid desaturase
Fatty acid desaturase {ECO:0000313|EMBL:AEF21567.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (s
SCNpilot_BF_INOC_scaffold_42_147
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188935..190188
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030CF75F
membrane protein
Membrane protein {ECO:0000313|EMBL:AHX15507.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_42_148
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190244..192157)
DNA (1914bp) protein (638aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Aeromonas diversa 2478-85 RepID=N9VLY6_9GAMM
putative two-component system sensor protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
putative two-component system sensor protein
SCNpilot_BF_INOC_scaffold_42_149
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192159..192719)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375149
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_150
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192716..194647)
DNA (1932bp) protein (644aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN50462.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
Putative uncharacterized protein id=1359346 bin=GWE1_T_denit_62_9 species=Massilia timonae genus=Massilia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Displaying items 121-150 of 181 in total

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