ggKbase home page

SCNpilot_BF_INOC_scaffold_42

Search features with annotation key words

Displaying items 91-120 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_42_91
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126822..127826)
DNA (1005bp) protein (335aa)
Putative limonene hydroxylase CD6-2 n=1 Tax=Enterobacter cloacae S611 RepID=V5AP20_ENTCL
Putative limonene hydroxylase CD6-2 {ECO:0000313|EMBL:ESS56974.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobact
SCNpilot_BF_INOC_scaffold_42_92
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127851..130382)
DNA (2532bp) protein (844aa)
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00393}; Short=GPAT {ECO:0000256|HAMAP-Rule:MF_00393};; EC=2.3.1.15 {ECO:0000256|HAMAP-Rule:MF_00393};; TaxID=1475481 species="Bacteria;
Glycerol-3-phosphate acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM0_9GAMM
glycerol-3-phosphate acyltransferase
SCNpilot_BF_INOC_scaffold_42_93
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130475..131398)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000368CA88
Uncharacterized protein {ECO:0000313|EMBL:KGI79134.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_94
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131740..132462)
DNA (723bp) protein (241aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
orotidine 5''''-phosphate decarboxylase n=1 Tax=Methylococcus capsulatus RepID=UPI00030FBC3E
orotidine 5'-phosphate decarboxylase
SCNpilot_BF_INOC_scaffold_42_95
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132470..133354)
DNA (885bp) protein (295aa)
Putative acid phosphatase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZDC5_XANCT
Acid phosphatase {ECO:0000313|EMBL:GAN45114.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
acid phosphatase
SCNpilot_BF_INOC_scaffold_42_96
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133446..135425)
DNA (1980bp) protein (660aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EAC1F
ATP-dependent DNA helicase Rep
SCNpilot_BF_INOC_scaffold_42_97
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135554..136174
DNA (621bp) protein (207aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1384056 species="Bacteria; Prote
thymidine kinase (EC:2.7.1.21)
thymidine kinase n=1 Tax=Rudaea cellulosilytica RepID=UPI000377E119
SCNpilot_BF_INOC_scaffold_42_98
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136194..137270)
DNA (1077bp) protein (359aa)
flagellar motor protein MotB n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4DB98
Uncharacterized protein {ECO:0000313|EMBL:KFN43484.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
OmpA/MotB domain-containing protein
SCNpilot_BF_INOC_scaffold_42_99
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137365..138177)
DNA (813bp) protein (271aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
mutM; formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035DF6E4
SCNpilot_BF_INOC_scaffold_42_100
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138177..138983)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037E07A7
Uncharacterized protein {ECO:0000313|EMBL:GAN45110.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_101
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138986..140338)
DNA (1353bp) protein (451aa)
ABC transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCN1_9GAMM
ABC transporter {ECO:0000313|EMBL:EIL97222.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxyda
ABC-type uncharacterized transporter
SCNpilot_BF_INOC_scaffold_42_102
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140338..141093)
DNA (756bp) protein (252aa)
ABC transporter permease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRD0_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL89771.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_103
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141090..141875)
DNA (786bp) protein (262aa)
ABC transporter related protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BW92_NITHN
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
ABC transporter
SCNpilot_BF_INOC_scaffold_42_104
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142002..143198
DNA (1197bp) protein (399aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLS5_9GAMM
Aminotransferase {ECO:0000313|EMBL:KGI79064.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
fatty-acid desaturase
SCNpilot_BF_INOC_scaffold_42_105
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143318..143725
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HML3_ACHXA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP18240.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylos
SCNpilot_BF_INOC_scaffold_42_106
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143760..145199
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003658FF5
Uncharacterized protein {ECO:0000313|EMBL:AHY59772.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_107
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(145348..145512)
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F7996
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
50S ribosomal protein L33
SCNpilot_BF_INOC_scaffold_42_108
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(145525..145821)
DNA (297bp) protein (99aa)
50S ribosomal protein L28 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC3_9GAMM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
rpmB; 50S ribosomal protein L28
SCNpilot_BF_INOC_scaffold_42_109
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146078..146563
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E83BC
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
protein-export chaperone SecB
SCNpilot_BF_INOC_scaffold_42_110
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146569..147585
DNA (1017bp) protein (339aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWF1_Xanthomonadales_69_6_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=2892122 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
gpsA; probable Glycerol-3-phosphate dehydrogenase [NAD(P)+]
SCNpilot_BF_INOC_scaffold_42_111
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147660..149528)
DNA (1869bp) protein (623aa)
aminopeptidase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B76825
aminopeptidase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
pepN; aminopeptidase
SCNpilot_BF_INOC_scaffold_42_112
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149741..150490)
DNA (750bp) protein (250aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-meth
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCS2_9GAMM
ubiquinone biosynthesis methyltransferase UbiE
SCNpilot_BF_INOC_scaffold_42_113
unknown

Not on your lists

comp(150606..151013)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_42_114
unknown

Not on your lists

comp(151176..151610)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_42_115
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151718..152074)
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN46748.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli
DUF971 domain containing protein id=2974426 bin=GWF1_Xanthomonadales_69_6 species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_42_116
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152083..152697)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B207C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46378.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_42_117
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152975..154273)
DNA (1299bp) protein (433aa)
isocitrate lyase n=1 Tax=Xanthomonas RepID=UPI00035E932D
isocitrate lyase
Isocitrate lyase {ECO:0000313|EMBL:AJC46678.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_BF_INOC_scaffold_42_118
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154316..155914)
DNA (1599bp) protein (533aa)
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WSJ4_9GAMM
Malate synthase {ECO:0000313|EMBL:GAN45073.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedim
SCNpilot_BF_INOC_scaffold_42_119
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156037..157101
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F0B3C
LysR family transcriptional regulator {ECO:0000313|EMBL:GAN45074.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source=
transcriptional regulator
SCNpilot_BF_INOC_scaffold_42_120
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157529..158218)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364EC72
OmpR family response regulator
Putative Response regulator, OmpR family {ECO:0000313|EMBL:AEA69999.1}; TaxID=994484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
Displaying items 91-120 of 181 in total

View Taxonomy