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SCNpilot_BF_INOC_scaffold_6_32

Organism: SCNpilot_BF_INOC_Xanthomonadales_67_72

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(39344..39709)

Top 3 Functional Annotations

Value Algorithm Source
PilH family regulatory protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W990_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 120.0
  • Bit_score: 206
  • Evalue 1.90e-50
PilH family regulatory protein {ECO:0000313|EMBL:EIL96031.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 120.0
  • Bit_score: 206
  • Evalue 2.60e-50
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 120.0
  • Bit_score: 201
  • Evalue 1.30e-49

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGCGCGAATTCTTATCGTCGACGATTCCCAGTCGCAGCTGCTGGGCCTCAAGCGCATCGTCGAGAAAATGGGCCACGAGATCATCACGGCCGAAGACGGCGCCGCCGGAGTCGAAGTCGCCAAGCGTGAGATTCCCGACCTGATCCTCATGGACGTGGTCATGCCGAACTTGAACGGCTTCCAGGCCACGCGCACGATCTCGCGCGAAGCCAAGACCAGCCACATTCCGATCATCCTCGTGACGACCAAGGACCAGGAAACCGACAAGGTCTGGGGCATGCGCCAGGGCGCCAAGGCCTACGTGACGAAGCCGATCAACGAGGCCGAGCTGACCAAGGTCATCAACGAGCTGCTGCCGAAGTAG
PROTEIN sequence
Length: 122
MARILIVDDSQSQLLGLKRIVEKMGHEIITAEDGAAGVEVAKREIPDLILMDVVMPNLNGFQATRTISREAKTSHIPIILVTTKDQETDKVWGMRQGAKAYVTKPINEAELTKVINELLPK*