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SCNpilot_BF_INOC_scaffold_1265

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1265_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(64..363)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 PF0_9PORP">RepID=K5ZPF0_9PORP
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD13770.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environ
SCNpilot_BF_INOC_scaffold_1265_2
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(453..1073)
DNA (621bp) protein (207aa)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Bacteroides RepID=D7IAA2_9BACE
RNA polymerase sigma-70 factor ECF subfamily {ECO:0000313|EMBL:CDC90107.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental sampl
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
SCNpilot_BF_INOC_scaffold_1265_3
unknown

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comp(1207..1350)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1265_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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1382..2254
DNA (873bp) protein (291aa)
Metallopeptidase, zinc binding id=4805203 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein; K07054 Tax=GWC2_Bacteroidetes_46_850_curated
metallopeptidase, zinc binding
SCNpilot_BF_INOC_scaffold_1265_5
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(2275..3228)
DNA (954bp) protein (318aa)
nitrilase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000346C5AF
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_1265_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3242..3937)
DNA (696bp) protein (232aa)
ABC transporter, ATP-binding protein id=1934247 bin=GWD2_Bacteroidales_45_23 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=GWC2_Bacteroidetes_46_850_curated
ABC transporter
SCNpilot_BF_INOC_scaffold_1265_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4105..5586)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037538F4
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_1265_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5597..7135)
DNA (1539bp) protein (513aa)
Putative uncharacterized protein id=3591102 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein; K06915 Tax=GWC2_Bacteroidetes_46_850_curated
yjgR; putative protein YjgR
SCNpilot_BF_INOC_scaffold_1265_9
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7272..8051)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035F6E04
transcriptional regulator
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:AGA80384.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophag
SCNpilot_BF_INOC_scaffold_1265_10
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8359..9765)
DNA (1407bp) protein (469aa)
alkH; Aldehyde dehydrogenase (EC:1.2.1.3)
aldehyde dehydrogenase n=1 Tax=Empedobacter brevis RepID=UPI00035D4B52
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia s
SCNpilot_BF_INOC_scaffold_1265_11
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9880..10692)
DNA (813bp) protein (271aa)
Arsenite S-adenosylmethyltransferase n=1 Tax=Imtechella halotolerans K1 RepID=I0W5J9_9FLAO
Arsenite S-adenosylmethyltransferase {ECO:0000313|EMBL:KIO47394.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguib
methylase involved in ubiquinone/menaquinone biosynthesis
SCNpilot_BF_INOC_scaffold_1265_12
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10750..11076)
DNA (327bp) protein (109aa)
Transcriptional regulator, ArsR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8Y8_9FLAO
HTH-type transcriptional repressor CzrA {ECO:0000313|EMBL:CEJ72009.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="
regulatory protein ArsR
SCNpilot_BF_INOC_scaffold_1265_13
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11257..13407)
DNA (2151bp) protein (717aa)
Serine protease, peptidase S9 family protein n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WNW8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC20092.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas s
serine protease, peptidase S9 family
SCNpilot_BF_INOC_scaffold_1265_14
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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13618..14460
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Bacteroides propionicifaciens RepID=UPI00036780C0
Recombinase {ECO:0000313|EMBL:KFF08738.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
integrase family protein
SCNpilot_BF_INOC_scaffold_1265_15
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15008..15322
DNA (315bp) protein (105aa)
Element, Orf2 protein, IS66 family n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CEB7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAE17254.1}; TaxID=1235809 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 6292.
hypothetical protein
SCNpilot_BF_INOC_scaffold_1265_16
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15399..16934
DNA (1536bp) protein (512aa)
IS66 family element, transposase n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CXP1_9BACE
IS66 family element, transposase {ECO:0000313|EMBL:ERI88838.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes
hypothetical protein
Displaying 16 items

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