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SCNpilot_BF_INOC_scaffold_236

Search features with annotation key words

Displaying items 31-60 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_236_31
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31233..32684)
DNA (1452bp) protein (484aa)
Putative uncharacterized protein id=1809755 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
mrdB; putative transmembrane rod shape-determining protein; K05837 rod shape determining protein RodA Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_32
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32668..34533)
DNA (1866bp) protein (622aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038186DD
penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=GWC2_Bacteroidetes_46_850_curated
penicillin-binding protein 2
SCNpilot_BF_INOC_scaffold_236_33
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34583..35101)
DNA (519bp) protein (173aa)
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEA16074.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
Rod shape-determining protein MreD id=1809751 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_236_34
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35101..35943)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380A4E3
rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:CEA16075.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" sou
SCNpilot_BF_INOC_scaffold_236_35
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35945..36970)
DNA (1026bp) protein (342aa)
MreB/Mrl family cell shape determining protein id=1809747 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
mbl; Mbl protein; K03569 rod shape-determining protein MreB and related proteins Tax=GWC2_Bacteroidetes_46_850_curated
mbl; MreB-like protein
SCNpilot_BF_INOC_scaffold_236_36
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37017..38540)
DNA (1524bp) protein (508aa)
IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10) Tax=GWC2_Bacteroidetes_46_850_curated
purH; Bifunctional purine biosynthesis protein PurH (EC:2.1.2.3)
Bifunctional purine biosynthesis protein purH id=1809745 bin=GWD2_Bacteroidales_45_23 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_236_37
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39274..39552
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUZ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03878.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
transposase
SCNpilot_BF_INOC_scaffold_236_38
unknown

Not on your lists

39657..40208
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_236_39
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40242..42194
DNA (1953bp) protein (651aa)
Beta-galactosidase trimerisation domain protein id=3703165 bin=GWF2_Bacteroidetes_42_66 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
beta-galactosidase trimerisation domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
beta-galactosidase trimerisation domain-containing protein
SCNpilot_BF_INOC_scaffold_236_40
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42218..44479
DNA (2262bp) protein (754aa)
Uncharacterized protein id=3163043 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_41
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

44480..46855
DNA (2376bp) protein (792aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMA1_9BACT
Uncharacterized protein Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_BF_INOC_scaffold_236_42
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46893..48053
DNA (1161bp) protein (387aa)
Creatinase id=1751487 bin=GWE2_Bacteroidetes_42_39 species=[Ruminococcus] gnavus genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
M24 family peptidase Tax=GWE2_Bacteroidetes_42_39_curated
M24 family peptidase
SCNpilot_BF_INOC_scaffold_236_43
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48066..48809
DNA (744bp) protein (248aa)
Mlr8484 protein id=3703171 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_44
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48811..49758
DNA (948bp) protein (316aa)
id=1751484 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
id=1751484 Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_BF_INOC_scaffold_236_45
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49772..50980
DNA (1209bp) protein (403aa)
Glucose/galactose transporter warning id=3703175 bin=GWF2_Bacteroidetes_42_66 species=Parabacteroides johnsonii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
sugar transporter Tax=GWE2_Bacteroidetes_42_39_curated
glucose/galactose transporter
SCNpilot_BF_INOC_scaffold_236_46
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51247..52395)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037EB8ED
transcriptional regulator; K02529 LacI family transcriptional regulator Tax=GWC2_Bacteroidetes_46_850_curated
transcriptional regulator
SCNpilot_BF_INOC_scaffold_236_47
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52816..53778)
DNA (963bp) protein (321aa)
transcriptional repressor; K00845 glucokinase [EC:2.7.1.2] Tax=GWC2_Bacteroidetes_46_850_curated
glucokinase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F4631
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_48
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54039..55487
DNA (1449bp) protein (483aa)
tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1] Tax=GWC2_Bacteroidetes_46_850_curated
Tryptophanase id=4136695 bin=GWC2_Bacteroidetes_46_850 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_49
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55617..56093)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378548D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA14669.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_236_50
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56144..57898)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D03F5
RagB/SusD hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CEA14667.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_236_51
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57921..61220)
DNA (3300bp) protein (1100aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003680854
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:CEA14665.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; un
putative outer membrane protein, probably involved in nutrient binding rbh
SCNpilot_BF_INOC_scaffold_236_52
unknown

Not on your lists

comp(61243..61350)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_236_53
unknown

Not on your lists

comp(61978..62067)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_236_54
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(62351..63397)
DNA (1047bp) protein (349aa)
penicillin amidase (EC:3.5.1.11) rbh
choloylglycine hydrolase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371F182
Choloylglycine hydrolase {ECO:0000313|EMBL:GAE84162.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis
SCNpilot_BF_INOC_scaffold_236_55
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63638..65338)
DNA (1701bp) protein (567aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Ba
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363F9AF
dihydrolipoyl dehydrogenase
SCNpilot_BF_INOC_scaffold_236_56
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65454..66563)
DNA (1110bp) protein (370aa)
acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:CEA16474.1}; EC=2.3.1.12 {ECO:0000313|EMBL:CEA16474.1};; TaxID=1562970 specie
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003635687
SCNpilot_BF_INOC_scaffold_236_57
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66605..67606)
DNA (1002bp) protein (334aa)
pdhB3; Pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D456A
Acetoin dehydrogenase E1 component beta-subunit {ECO:0000313|EMBL:GAK37925.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacter
SCNpilot_BF_INOC_scaffold_236_58
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67718..68713)
DNA (996bp) protein (332aa)
acoA; TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit (EC:1.1.1.-)
pyruvate dehydrogenase E1 subunit alpha n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003762D53
Acetoin dehydrogenase E1 component alpha-subunit {ECO:0000313|EMBL:GAK37926.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacte
SCNpilot_BF_INOC_scaffold_236_59
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(68965..70701)
DNA (1737bp) protein (579aa)
integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=GWC2_Bacteroidetes_46_850_cura
Putative uncharacterized protein id=3951467 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_60
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(70698..71390)
DNA (693bp) protein (231aa)
Putative uncharacterized protein id=3951465 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
two component transcriptional regulator, winged helix family Tax=GWC2_Bacteroidetes_46_850_curated
two component transcriptional regulator, winged helix family
Displaying items 31-60 of 223 in total

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