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SCNpilot_BF_INOC_scaffold_236

Search features with annotation key words

Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_236_1
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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102..2246
DNA (2145bp) protein (715aa)
Alpha-galactosidase {ECO:0000313|EMBL:EEY81564.1}; EC=3.2.1.22 {ECO:0000313|EMBL:EEY81564.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;"
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJH8_9BACE
SCNpilot_BF_INOC_scaffold_236_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2318..3262
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035EB489
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA15684.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_236_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3259..4149
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378F359
id=1922359 Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_BF_INOC_scaffold_236_4
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4168..4554)
DNA (387bp) protein (129aa)
HEPN domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7P2_PALPW
hepn domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KKB54177.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
SCNpilot_BF_INOC_scaffold_236_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4567..4881)
DNA (315bp) protein (105aa)
DNA polymerase beta domain protein region n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7P3_PALPW
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ADQ80737.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludiba
SCNpilot_BF_INOC_scaffold_236_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4978..6243)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000365E549
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6379..9156
DNA (2778bp) protein (926aa)
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
Uncharacterized protein id=4756119 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9179..10258
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CC72C
two-component system sensor Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10434..11141
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036996DE
two-component system response regulator Tax=GWC2_Bacteroidetes_46_850_curated
two-component system response regulator
SCNpilot_BF_INOC_scaffold_236_10
unknown

Not on your lists

comp(11138..11320)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_236_11
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11448..11942)
DNA (495bp) protein (165aa)
Appr-1-p processing protein Tax=GWA2_Bacteroidetes_31_9b_curated
Appr-1-p processing domain protein id=4781900 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
phosphatase
SCNpilot_BF_INOC_scaffold_236_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11954..13018)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003806C52
magnesium and cobalt transport protein cora; K03284 magnesium transporter Tax=GWC2_Bacteroidetes_46_850_curated
magnesium and cobalt transport protein cora
SCNpilot_BF_INOC_scaffold_236_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13132..15303)
DNA (2172bp) protein (724aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] Tax=GWC2_Bacteroidetes_46_850_curated
mutB; Methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase large subunit id=4136679 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_236_14
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

Not on your lists

comp(15499..16401)
DNA (903bp) protein (301aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000313|EMBL:EPT32790.1}; EC=2.5.1.74 {ECO:0000313|EMBL:EPT32790.1};; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacte
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C50FE
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
SCNpilot_BF_INOC_scaffold_236_15
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16466..16819)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037AFE31
s23 ribosomal protein Tax=CG_Paludi_01
S23 ribosomal protein
SCNpilot_BF_INOC_scaffold_236_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16852..18750)
DNA (1899bp) protein (633aa)
mutA; methylmalonyl-CoA mutase, small subunit; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D4015
methylmalonyl-CoA mutase small subunit
SCNpilot_BF_INOC_scaffold_236_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19165..20040
DNA (876bp) protein (292aa)
Xylanase id=1747118 bin=GWD2_Bacteroidales_45_23 species=Bacteroides finegoldii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
xylanase Tax=GWC2_Bacteroidetes_46_850_curated
Esterase/lipase
SCNpilot_BF_INOC_scaffold_236_18
unknown

Not on your lists

comp(20037..20204)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_236_19
unknown

Not on your lists

comp(20167..20340)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_236_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20442..23216
DNA (2775bp) protein (925aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphin
aconitate hydratase (EC:4.2.1.3) rbh
Aconitate hydratase 1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NT57_9SPHI
SCNpilot_BF_INOC_scaffold_236_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23239..23985)
DNA (747bp) protein (249aa)
Putative uncharacterized protein id=1809771 bin=GWD2_Bacteroidales_45_23 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Uncharacterized protein, putative amidase Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_22
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23992..25158)
DNA (1167bp) protein (389aa)
Major facilitator superfamily MFS_1 id=4379204 bin=GWA2_Bacteroidetes_A19_40_15 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
major facilitator superfamily protein Tax=GWA2_Bacteroidetes_40_15_curated
major facilitator superfamily protein
SCNpilot_BF_INOC_scaffold_236_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25174..26043)
DNA (870bp) protein (290aa)
Putative uncharacterized protein id=4136682 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
transcriptional regulator, LuxR family Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_24
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26053..26391)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000366D790
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16069.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_236_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26569..27258)
DNA (690bp) protein (230aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWC2_Bacteroidetes_46_850_curated
monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.1.-)
Monofunctional biosynthetic peptidoglycan transglycosylase id=1809765 bin=GWD2_Bacteroidales_45_23 species=Bacteroides plebeius genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_236_26
Alistipes sp. CAG:831, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27255..27704)
DNA (450bp) protein (150aa)
Alanyl-tRNA synthetase n=1 Tax=Alistipes sp. CAG:831 RepID=R5I4S9_9BACT
Alanyl-tRNA synthetase {ECO:0000313|EMBL:CCY36980.1}; TaxID=1262698 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes s
alanyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_236_27
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(27821..28438)
DNA (618bp) protein (206aa)
rubrerythrin id=4379372 bin=GWF2_Bacteroidetes_43_11 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
rubrerythrin
Tax=BJP_IG2102_Bacteroidetes_40_9
SCNpilot_BF_INOC_scaffold_236_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28476..28907)
DNA (432bp) protein (144aa)
hypothetical protein AtheD1_15457 id=4327229 bin=GWF2_Bacteroidetes_40_13 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein AtheD1_15457 Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_BF_INOC_scaffold_236_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29082..30380)
DNA (1299bp) protein (433aa)
Putative uncharacterized protein id=1809763 bin=GWD2_Bacteroidales_45_23 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30456..31223)
DNA (768bp) protein (256aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3W1_PALPW
uba/thif-type nad/fad binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ADQ79405.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter
Displaying items 1-30 of 223 in total

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