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SCNpilot_BF_INOC_scaffold_236

Search features with annotation key words

Displaying items 181-210 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_236_181
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

204861..207062
DNA (2202bp) protein (734aa)
ATP-dependent DNA helicase recQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=GWC2_Bacteroidetes_46_850_curated
ATP-dependent DNA helicase RecQ n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003608665
ATP-dependent DNA helicase RecQ
SCNpilot_BF_INOC_scaffold_236_182
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

207127..209088
DNA (1962bp) protein (654aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=GWC2_Bacteroidetes_46_850_curated
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase id=2117764 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_236_183
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

209145..210482
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C8574
trkA; potassium transporter peripheral membrane protein; K03499 trk system potassium uptake protein TrkA Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_184
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(210587..212089)
DNA (1503bp) protein (501aa)
scpC; Propionyl-CoA:succinate CoA transferase (EC:2.8.3.-)
Propionyl-CoA:succinate CoA transferase {ECO:0000313|EMBL:CEA16463.1}; EC=2.8.3.- {ECO:0000313|EMBL:CEA16463.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromo
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CB8DB
SCNpilot_BF_INOC_scaffold_236_185
unknown

Not on your lists

comp(212131..212547)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_236_186
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

212879..214240
DNA (1362bp) protein (454aa)
miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035C41EB
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_BF_INOC_scaffold_236_187
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214343..214585
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035FB631
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16466.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_236_188
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214616..214996
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003826488
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEA16467.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
SCNpilot_BF_INOC_scaffold_236_189
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214996..215376
DNA (381bp) protein (127aa)
hypothetical protein
id=1847135 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
id=1847135 Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_BF_INOC_scaffold_236_190
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(215391..217739)
DNA (2349bp) protein (783aa)
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374A72D
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_191
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

217973..220225
DNA (2253bp) protein (751aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B3892
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_192
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

220235..220801
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F1778
nicotinamide mononucleotide transporter; K03811 nicotinamide mononucleotide transporter Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_193
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(220833..221186)
DNA (354bp) protein (118aa)
transcriptional regulator
Transcriptional regulator id=4913144 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides sp. 3_1_23 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
transcriptional regulator catabolite control protein A; K02529 LacI family transcriptional regulator Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_BF_INOC_scaffold_236_194
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

221529..221825
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V8B1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86823.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_195
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

221838..222242
DNA (405bp) protein (135aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6V8C2_9BACE
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC88301.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" so
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_196
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(222551..223633)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJ82_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL72699.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" sourc
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_236_197
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

223743..226163
DNA (2421bp) protein (807aa)
DNA mismatch repair protein MutS; K07456 DNA mismatch repair protein MutS2 Tax=GWC2_Bacteroidetes_46_850_curated
MutS2 protein id=4756159 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_198
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

226233..227609
DNA (1377bp) protein (459aa)
permease n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E756C
major facilitator superfamily mfs_1 Tax=GWC2_Bacteroidetes_46_850_curated
major facilitator superfamily protein
SCNpilot_BF_INOC_scaffold_236_199
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

227785..229785
DNA (2001bp) protein (667aa)
LmbE family protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037598EB
putative glucosamine-6-phosphate deaminase-like protein BT_0258
SCNpilot_BF_INOC_scaffold_236_200
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(229812..230405)
DNA (594bp) protein (198aa)
putative oxygen regulatory protein NreC rbh
Putative oxygen regulatory protein NreC {ECO:0000313|EMBL:CEA15251.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;
Putative oxygen regulatory protein NreC id=1934231 bin=GWD2_Bacteroidales_45_23 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_236_201
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(230426..232348)
DNA (1923bp) protein (641aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CEA15250.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein id=1934229 bin=GWD2_Bacteroidales_45_23 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_236_202
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

232549..233115
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035CDD80
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEA15249.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
SCNpilot_BF_INOC_scaffold_236_203
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

233127..234419
DNA (1293bp) protein (431aa)
OmpA/MotB domain protein id=3590874 bin=GWC2_Bacteroidetes_46_850 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_204
unknown

Not on your lists

234580..235563
DNA (984bp) protein (328aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_236_205
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

235673..236065
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003821EC8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA15717.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_236_206
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

236423..238321
DNA (1899bp) protein (633aa)
Uncharacterized protein id=1897835 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
putative permease
SCNpilot_BF_INOC_scaffold_236_207
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

238332..239552
DNA (1221bp) protein (407aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=GWC2_Bacteroidetes_46_850_curated
ribBA; Riboflavin biosynthesis protein RibBA (EC:4.1.99.12)
Riboflavin biosynthesis protein ribBA id=1897833 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_236_208
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

239566..240888
DNA (1323bp) protein (441aa)
Putative uncharacterized protein id=1897830 bin=GWD2_Bacteroidales_45_23 species=Bacteroides plebeius genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
RmuC-domain-containing protein; K09760 DNA recombination protein RmuC Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_236_209
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

240915..242102
DNA (1188bp) protein (396aa)
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
kbl; 2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=GWC2_Bacteroidetes_46_850_curated
2-amino-3-ketobutyrate CoA ligase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003677BF0
SCNpilot_BF_INOC_scaffold_236_210
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

242131..243156
DNA (1026bp) protein (342aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103] Tax=GWC2_Bacteroidetes_46_850_curated
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase id=1897824 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Displaying items 181-210 of 223 in total

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