ggKbase home page

SCNpilot_BF_INOC_scaffold_691

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_691_1
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..2436)
DNA (2436bp) protein (812aa)
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1562970 species="Bacteria; Bacter
leucyl-tRNA synthetase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003743B61
SCNpilot_BF_INOC_scaffold_691_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2481..4286)
DNA (1806bp) protein (602aa)
putative long-chain-fatty-acid-CoA ligase (EC:6.2.1.3)
Putative long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:CEA16750.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CEA16750.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyro
Putative uncharacterized protein id=1730773 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_691_3
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4495..5130
DNA (636bp) protein (212aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16751.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
Putative uncharacterized protein id=4482905 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_691_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5202..6935
DNA (1734bp) protein (578aa)
Sulfate transporter id=4482906 bin=GWC2_Bacteroidetes_46_850 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
sulfate transporter; K03321 sulfate permease, SulP family Tax=GWC2_Bacteroidetes_46_850_curated
sulfate transporter
SCNpilot_BF_INOC_scaffold_691_5
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6961..8796
DNA (1836bp) protein (612aa)
UPF0313 protein
UPF0313 protein ING2E5B_2024 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" sourc
UPF0313 protein HMPREF9456_00284 id=1730776 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_691_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8878..9612
DNA (735bp) protein (245aa)
Putative uncharacterized protein id=1730777 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
putative membrane protein
SCNpilot_BF_INOC_scaffold_691_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9854..10837
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036EAB89
FucR Tax=GWC2_Bacteroidetes_46_850_curated
fucR; GntR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_691_8
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10923..12692
DNA (1770bp) protein (590aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SA
fucose isomerase n=1 Tax=Bacteroides barnesiae RepID=UPI000361FB4F
L-fucose isomerase
SCNpilot_BF_INOC_scaffold_691_9
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12717..12854
DNA (138bp) protein (46aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI000374E821
L-fucose permease {ECO:0000313|EMBL:CEN33554.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;
major facilitator transporter
SCNpilot_BF_INOC_scaffold_691_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13144..14556
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373C109
oxidoreductase Tax=GWC2_Bacteroidetes_46_850_curated
putative GFO/IDH/MOCA family oxidoreductase
SCNpilot_BF_INOC_scaffold_691_11
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14537..16390
DNA (1854bp) protein (618aa)
Alpha-1,3-galactosidase B n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UJT7_TANFA
glaB; Alpha-1,3-galactosidase B
Alpha-1,3-galactosidase B {ECO:0000313|EMBL:CEA16339.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
SCNpilot_BF_INOC_scaffold_691_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16571..18643)
DNA (2073bp) protein (691aa)
Putative uncharacterized protein id=3869832 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_691_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18644..19078)
DNA (435bp) protein (145aa)
Putative uncharacterized protein id=3869831 bin=GWC2_Bacteroidetes_46_850 species=Prevotella bryantii genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
ATPase/GTPase; K06925 UPF0079 ATP-binding protein Tax=GWC2_Bacteroidetes_46_850_curated
ATPase
SCNpilot_BF_INOC_scaffold_691_14
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19087..20631)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B1G6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47085.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HG
chemotaxis protein CheY
SCNpilot_BF_INOC_scaffold_691_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20837..21475
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036068F8
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_691_16
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21529..22758
DNA (1230bp) protein (410aa)
OAT; Ornithine aminotransferase, mitochondrial (EC:2.6.1.13)
Ornithine aminotransferase, mitochondrial {ECO:0000313|EMBL:CEA16887.1}; EC=2.6.1.13 {ECO:0000313|EMBL:CEA16887.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyr
ornithine aminotransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000360448B
SCNpilot_BF_INOC_scaffold_691_17
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22816..23694
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369852D
amidinotransferase rbh
Amidinotransferase {ECO:0000313|EMBL:CEA16888.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromon
SCNpilot_BF_INOC_scaffold_691_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23790..24179
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D0B92
large conductance mechanosensitive channel protein; K03282 large conductance mechanosensitive channel Tax=GWC2_Bacteroidetes_46_850_curated
putative membrane protein
SCNpilot_BF_INOC_scaffold_691_19
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24223..24993)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000375FD80
DNA metabolism protein {ECO:0000313|EMBL:KGN74484.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_691_20
unknown

Not on your lists

comp(25147..25266)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_691_21
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25481..26434)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HR75_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE41751.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
SCNpilot_BF_INOC_scaffold_691_22
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26466..29027)
DNA (2562bp) protein (854aa)
Outer membrane protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HS83_9BACT
Outer membrane protein {ECO:0000313|EMBL:CDE41833.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotell
Outer membrane receptor for ferrienterochelin and colicins
SCNpilot_BF_INOC_scaffold_691_23
unknown

Not on your lists

comp(29065..29682)
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_691_24
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29708..30514)
DNA (807bp) protein (269aa)
Putative uncharacterized protein id=3183844 bin=GWF2_Bacteroidetes_39_10 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_39_28_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_691_25
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30520..31296)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) PF0_CLOSH">RepID=M4YPF0_CLOSH
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_691_26
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31706..33076)
DNA (1371bp) protein (457aa)
biotin synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036DCE05
Radical SAM protein {ECO:0000313|EMBL:KGN68626.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH
putative DNA modification/repair radical SAM protein
SCNpilot_BF_INOC_scaffold_691_27
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33196..33591
DNA (396bp) protein (132aa)
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEA16890.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
Putative uncharacterized protein id=3869825 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_691_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33601..34158
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003696DD6
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_691_29
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34173..34547
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376D7AD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16892.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_691_30
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34521..35405)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003687C5A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16893.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
Displaying items 1-30 of 32 in total

View Taxonomy