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SCNpilot_BF_INOC_scaffold_323_8

Organism: SCNpilot_BF_INOC_Bacteroidetes_43_41

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 6254..7708

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 484.0
  • Bit_score: 695
  • Evalue 8.70e-198
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CEA15959.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 484.0
  • Bit_score: 695
  • Evalue 4.30e-197
RNA polymerase sigma-54 factor id=1934015 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 485.0
  • Bit_score: 690
  • Evalue 1.70e-195

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Taxonomy

Porphyromonadaceae bacterium ING2-E5B → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1455
ATGGCACTCAGACAACAACAGGAACTCAAACAGACTCAAAAGTTATCGCCCTTGCAAATGCAAGTGATAAAACTGGTTGAATTGAATTCGGTAGAGTTGGAGGACAAAATAAAACAGGAGTTGGAAGATAATCCTGCACTGGAAGAAGGAAATGAAGAACTCAATTCAGAGAATTCAGACGATGATTTTCCGGAAAGTGAAGATAACTTATCGGAAGAAGATATTGTGTTAGGCGATTATTTTTCCGAAGAAGATATTCCTGATTACCAATTAAATAAATCTTACAGAAAAGACGAGCCTGATTTTATCGAAGCAACTTATTCCGACGATAAAAGCCTCAACGAAGTTTTGCTGGAACAAATTGGCTTACGCCAGTTGAATGCCCGGGATCAGAAAATTGCCGAGTACATTATCGGTAACCTCGACGAGAACGGATACTTACAACGAAGCCTGCAAGCCATATCCGATGATCTGTTGTTTCAACAGAACCTCGATATTAGTGAGACAAAATTACAATCCATATTGGAGATCATTCAAGACCTCGACCCCGCGGGCGTTGGAGCGAGCGATTTGCAGGAATGCCTGAAGCTTCAGTTGCAAAGGAACGAACCCACGAGGGAAAACAGACTGGCGCTGGAGATTATTTCGGATTATTTCGAAGAGTTTTCGCGTAAGCATTATGACAAAATCATGCGTCAACTGAATATCTCACAAGACGATTTGCGCAACGCCATCAACGGTATCATTTCACTCAATCCCAAACCCGGAAATGCTTTGGGCGATTCAATAGAAGTTGCCATGAGCAACATTACGCCCGATTTTATTGTGGAATCCTACAACGGTGAAATCAGTATGTATTTGAACAACAAAAACATACCGGAGTTGAAAATAAACCGCGATTTCTCCGAAATGCTACAGGGATACGCTCAAAACAAAGAAAGTATGAGCAACGATGCCAAACAAGCTGTATTGTTTATGAAACAGAAGGTAGATTCAGCAAAATGGTTCATAGATGCTGTGCGACAACGACAAAACACGCTCCAAAGGACAATGGAAGCGATCGTTAATTTTCAGTACGATTTTTTCGCCACAGAAGACGAGACAATGCTCAGGCCAATGATACTTAAAGATATAGCAAATAAAACCGGATTCGATATTTCAACCATATCCCGTGTAAGCAACAGCAAATACGTACAAACCAACAATGGCGTTTATCCGCTGAAGTTTTTCTTTTCCGAAGCGATGCAAAACGATGCGGGAGAAGATATTTCGTCGCGTGAAGTAAAAGTTCTTCTGAAAGAATGCATCGAGAACGAAAATCCCTCCAAACCGCTTACCGACGAACAACTGACAACATTGTTGAACAATAAGGGTTATATTATTGCCCGCCGCACAGTAGCAAAATATCGTGAACAGTTGAATATTCCTGTAGCGCGTTTAAGAAAAAAAATTTAA
PROTEIN sequence
Length: 485
MALRQQQELKQTQKLSPLQMQVIKLVELNSVELEDKIKQELEDNPALEEGNEELNSENSDDDFPESEDNLSEEDIVLGDYFSEEDIPDYQLNKSYRKDEPDFIEATYSDDKSLNEVLLEQIGLRQLNARDQKIAEYIIGNLDENGYLQRSLQAISDDLLFQQNLDISETKLQSILEIIQDLDPAGVGASDLQECLKLQLQRNEPTRENRLALEIISDYFEEFSRKHYDKIMRQLNISQDDLRNAINGIISLNPKPGNALGDSIEVAMSNITPDFIVESYNGEISMYLNNKNIPELKINRDFSEMLQGYAQNKESMSNDAKQAVLFMKQKVDSAKWFIDAVRQRQNTLQRTMEAIVNFQYDFFATEDETMLRPMILKDIANKTGFDISTISRVSNSKYVQTNNGVYPLKFFFSEAMQNDAGEDISSREVKVLLKECIENENPSKPLTDEQLTTLLNNKGYIIARRTVAKYREQLNIPVARLRKKI*