ggKbase home page

SCNpilot_BF_INOC_scaffold_323

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_323_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(383..1603)
DNA (1221bp) protein (407aa)
Peptidase M16 inactive domain protein id=1934003 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
zinc protease YmxG Tax=GWC2_Bacteroidetes_46_850_curated
peptidase M16
SCNpilot_BF_INOC_scaffold_323_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1619..2329)
DNA (711bp) protein (237aa)
Putative uncharacterized protein id=1934005 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
DNA alkylation repair protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_323_3
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2448..3404)
DNA (957bp) protein (319aa)
gyaR; Glyoxylate reductase (EC:1.1.1.26)
Glyoxylate reductase {ECO:0000313|EMBL:CEA15955.1}; EC=1.1.1.26 {ECO:0000313|EMBL:CEA15955.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassi
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003722AA9
SCNpilot_BF_INOC_scaffold_323_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3830..4387
DNA (558bp) protein (186aa)
Putative uncharacterized protein id=1934011 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_323_5
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4429..5343
DNA (915bp) protein (305aa)
miaA1-2; tRNA dimethylallyltransferase 1 (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E5DBF
SCNpilot_BF_INOC_scaffold_323_6
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5347..5712)
DNA (366bp) protein (122aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16366.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
Putative uncharacterized protein id=2175214 bin=GWE2_Bacteroidetes_42_39 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
SCNpilot_BF_INOC_scaffold_323_7
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5845..6168
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369F8CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA15958.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_323_8
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6254..7708
DNA (1455bp) protein (485aa)
RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CEA15959.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source=
RNA polymerase sigma-54 factor id=1934015 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_323_9
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7738..8346
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000360EC2C
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEA15960.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
SCNpilot_BF_INOC_scaffold_323_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8461..8841
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J1T0_9PORP
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas
glycine cleavage system H protein
SCNpilot_BF_INOC_scaffold_323_11
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8902..9408
DNA (507bp) protein (169aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Dysgonomonas RepID=F8WWQ0_9PORP
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
SCNpilot_BF_INOC_scaffold_323_12
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9577..10770
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI000375D016
Uncharacterized protein {ECO:0000313|EMBL:KKB48536.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
glycosyl transferase
SCNpilot_BF_INOC_scaffold_323_13
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10793..11749
DNA (957bp) protein (319aa)
Glycosyl transferase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J4U6_DESMD
glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:AFQ45971.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (stra
SCNpilot_BF_INOC_scaffold_323_14
Alistipes sp. CAG:514, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11920..12912
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378AD23
Uncharacterized protein {ECO:0000313|EMBL:CCX52022.1}; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes
hypothetical protein
SCNpilot_BF_INOC_scaffold_323_15
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12955..13872
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IJ38_9BACE
capsular polysaccharide synthesis protein
Putative capsular polysaccharide synthesis protein {ECO:0000313|EMBL:AAO77978.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bact
SCNpilot_BF_INOC_scaffold_323_16
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

comp(13901..14692)
DNA (792bp) protein (264aa)
Beta-1,3-N-acetylglucosaminyltransferase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCC1_9BACT
Beta-1,3-N-acetylglucosaminyltransferase {ECO:0000313|EMBL:EFI16540.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
family 2 glycosyl transferase
SCNpilot_BF_INOC_scaffold_323_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14716..15720)
DNA (1005bp) protein (335aa)
3-oxoacyl-ACP synthase; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=GWC2_Bacteroidetes_46_850_curated
fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC:2.3.1.180)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003672F16
SCNpilot_BF_INOC_scaffold_323_18
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15794..15979)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 id=2159284 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="
SCNpilot_BF_INOC_scaffold_323_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16010..16591)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C7182
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_323_20
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16693..17793)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368E1E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16146.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_323_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17855..18502)
DNA (648bp) protein (216aa)
Uncharacterized protein id=2159276 bin=GWD2_Bacteroidales_45_23 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_323_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18759..22445)
DNA (3687bp) protein (1229aa)
5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=GWC2_Bacteroidetes_46_850_curated
metH; Methionine synthase (EC:2.1.1.13)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003813777
SCNpilot_BF_INOC_scaffold_323_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22436..23380)
DNA (945bp) protein (315aa)
Transporter gate domain protein id=3935034 bin=GWC2_Bacteroidetes_46_850 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
transporter gate domain-containing protein Tax=GWC2_Bacteroidetes_46_850_curated
nucleoside recognition domain protein
SCNpilot_BF_INOC_scaffold_323_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23377..23829)
DNA (453bp) protein (151aa)
single-stranded DNA-binding protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003727C40
SsrA-binding protein; K03664 SsrA-binding protein Tax=GWC2_Bacteroidetes_46_850_curated
putative SsrA-binding protein
SCNpilot_BF_INOC_scaffold_323_25
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23834..24403)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036025EF
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEA14806.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
SCNpilot_BF_INOC_scaffold_323_26
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24589..26295
DNA (1707bp) protein (569aa)
4Fe-4S binding domain protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4R3_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDE70833.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="
putative PAS/PAC sensor protein
SCNpilot_BF_INOC_scaffold_323_27
Alistipes sp. CAG:831, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26308..27468
DNA (1161bp) protein (387aa)
Stage II sporulation protein E n=1 Tax=Alistipes sp. CAG:831 RepID=R5IDG1_9BACT
Stage II sporulation protein E {ECO:0000313|EMBL:CCY34821.1}; TaxID=1262698 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Ali
Stage II sporulation protein E (SpoIIE).
SCNpilot_BF_INOC_scaffold_323_28
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27549..27947)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CG95_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS33768.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_323_29
unknown

Not on your lists

comp(27944..28081)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_323_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28158..28679
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003822937
RNA polymerase, sigma-24 subunit, ecf subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADQ79543.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludib
Displaying items 1-30 of 85 in total

View Taxonomy