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SCNpilot_BF_INOC_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_393_1
unknown

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3..1250
DNA (1248bp) protein (416aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_393_2
Prevotella oralis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1303..1917)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI0003605264
Uncharacterized protein {ECO:0000313|EMBL:EFZ36694.1}; TaxID=873533 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oralis ATCC 33269.;"
SCNpilot_BF_INOC_scaffold_393_3
GWF2_TM6_37_49, TM6, Bacteria

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comp(1941..3980)
DNA (2040bp) protein (680aa)
Multi-sensor hybrid histidine kinase Tax=GWF2_TM6_37_49
PAS sensor protein id=1838414 bin=GWE2_Bacteroidetes_40_15 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
PAS domain protein
SCNpilot_BF_INOC_scaffold_393_4
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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4027..5994
DNA (1968bp) protein (656aa)
PAS sensor protein id=1838414 bin=GWE2_Bacteroidetes_40_15 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_BF_INOC_scaffold_393_5
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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6118..7470
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYG8_9PORP
outer membrane efflux protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_6
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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7475..8380
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYS6_9PORP
membrane protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_7
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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8361..9332
DNA (972bp) protein (324aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T802_PALPW
ABC transporter
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_8
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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9329..10066
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8XF66_9BACE
ABC transporter ATP-binding protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_9
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

10063..11142
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035CE064
multidrug ABC transporter permease
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_10
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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11145..12245
DNA (1101bp) protein (367aa)
Putative uncharacterized protein id=1790723 bin=GWE2_Bacteroidetes_42_42 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
ABC-type multidrug transport system, permease component
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_11
Bacteroides sp. CAG:1060, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12319..13506)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1060 RepID=R5BWE7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCX55751.1}; TaxID=1262734 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
SCNpilot_BF_INOC_scaffold_393_12
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13810..14469
DNA (660bp) protein (220aa)
CRISPR-associated Cas5e family protein Tax=GWB2_Bacteroidetes_41_8_curated
CRISPR-associated endoribonuclease Cas6 id=4332189 bin=GWF2_Bacteroidetes_35_48 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
CRISPR-associated Cas5e family protein
SCNpilot_BF_INOC_scaffold_393_13
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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14528..15073
DNA (546bp) protein (182aa)
Uncharacterized protein id=4332190 bin=GWF2_Bacteroidetes_35_48 species=Prevotella oris genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_BF_INOC_scaffold_393_14
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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15073..17214
DNA (2142bp) protein (714aa)
HD domain-containing protein id=4332191 bin=GWF2_Bacteroidetes_35_48 species=Prevotella oris genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
CRISPR-associated helicase Cas3 core
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_BF_INOC_scaffold_393_15
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

17227..18549
DNA (1323bp) protein (441aa)
Putative uncharacterized protein id=4332192 bin=GWF2_Bacteroidetes_35_48 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
SCNpilot_BF_INOC_scaffold_393_16
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

18561..19658
DNA (1098bp) protein (366aa)
Putative uncharacterized protein id=4332194 bin=GWF2_Bacteroidetes_35_48 species=Porphyromonas endodontalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_BF_INOC_scaffold_393_17
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

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19715..20233
DNA (519bp) protein (173aa)
CRISPR-associated protein Cas4; K07464 putative RecB family exonuclease Tax=GWE2_Bacteroidetes_39_28_curated
hypothetical protein AtheD1_17979 id=2137790 bin=GWE2_Bacteroidetes_39_28 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_393_18
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20245..21249
DNA (1005bp) protein (335aa)
CRISPR-associated protein Cas1 id=2137792 bin=GWE2_Bacteroidetes_39_28 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
cas1; CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype; K15342 CRISP-associated protein Cas1 Tax=GWE2_Bacteroidetes_39_28_curated
cas1; CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype
SCNpilot_BF_INOC_scaffold_393_19
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

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21251..21514
DNA (264bp) protein (88aa)
CRISPR-associated protein Cas2 id=2137794 bin=GWE2_Bacteroidetes_39_28 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
cas2-2; CRISPR-associated Cas2 family protein Tax=GWE2_Bacteroidetes_39_28_curated
cas2-2; CRISPR-associated Cas2 family protein
SCNpilot_BF_INOC_scaffold_393_20
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(27168..27581)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELZ5_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49820.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi
SCNpilot_BF_INOC_scaffold_393_21
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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27839..28279
DNA (441bp) protein (147aa)
id=4175808 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_22
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28367..29488
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YC60_TREAZ
Uncharacterized protein {ECO:0000313|EMBL:GAO30629.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_393_23
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

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29485..30894
DNA (1410bp) protein (470aa)
Beta-lactamase id=2097577 bin=GWE2_Bacteroidetes_39_28 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
beta-lactamase
Tax=BJP_IG2103_Bacteroidetes_40_10
SCNpilot_BF_INOC_scaffold_393_24
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

30968..31447
DNA (480bp) protein (160aa)
Sigma-70 family RNA polymerase sigma factor id=4280620 bin=GWF2_Bacteroidetes_39_10 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_25
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

31456..32043
DNA (588bp) protein (196aa)
Uncharacterized protein id=2138177 bin=GWE2_Bacteroidetes_39_28 species=Parabacteroides goldsteinii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_26
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(32055..32735)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YF48_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_27
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(32798..33631)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y197_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_28
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(33615..34889)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein id=2918173 bin=GWF2_Bacteroidetes_40_14 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_29
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(34886..36097)
DNA (1212bp) protein (404aa)
Putative uncharacterized protein id=2918179 bin=GWF2_Bacteroidetes_40_14 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_393_30
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(36066..36758)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XL79_9BACT
ABC transporter
Tax=BJP_IG2069_Bacteroidetes_43_11
Displaying items 1-30 of 55 in total

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