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SCNpilot_BF_INOC_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 349 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_116_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

263..3229
DNA (2967bp) protein (989aa)
N6 adenine-specific DNA methyltransferase protein, N12 class n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRW6_9BURK
N6 adenine-specific DNA methyltransferase protein, N12 class {ECO:0000313|EMBL:EHL24982.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
yeeA; Putative DNA methyltransferase yeeA
SCNpilot_BF_INOC_scaffold_116_2
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3236..3772)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FXI9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KEA61854.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacteri
hypothetical protein
SCNpilot_BF_INOC_scaffold_116_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4368..4658
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRW5_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24981.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
SCNpilot_BF_INOC_scaffold_116_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4665..5318)
DNA (654bp) protein (218aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC59_NAKMY
SCNpilot_BF_INOC_scaffold_116_5
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5327..6145)
DNA (819bp) protein (273aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethy
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W8L4_9MICO
SCNpilot_BF_INOC_scaffold_116_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6226..7089)
DNA (864bp) protein (288aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=1144315 spe
NAD-dependent deacetylase n=1 Tax=Variovorax paradoxus RepID=UPI00037DDAE9
silent information regulator protein sir2
SCNpilot_BF_INOC_scaffold_116_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7125..8171)
DNA (1047bp) protein (349aa)
DNA polymerase III subunit delta n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037014CE
DNA polymerase III subunit delta {ECO:0000313|EMBL:GAD23388.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
holA; DNA polymerase III subunit delta
SCNpilot_BF_INOC_scaffold_116_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8357..8857)
DNA (501bp) protein (167aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379DEA1
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
rare lipoprotein b
SCNpilot_BF_INOC_scaffold_116_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8869..11571)
DNA (2703bp) protein (901aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1268622 species="Bacteria; Proteo
leucyl-tRNA synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003748B41
leuS; leucyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_116_10
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11791..12480)
DNA (690bp) protein (230aa)
Peptidase S24/S26A/S26B, conserved region n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9A7_ACIAP
peptidase S24/S26A/S26B, conserved region
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:ADX48352.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acid
SCNpilot_BF_INOC_scaffold_116_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12548..14719
DNA (2172bp) protein (724aa)
Diguanylate cyclase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TW46_ALIDB
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADV01820.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
SCNpilot_BF_INOC_scaffold_116_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14756..15184)
DNA (429bp) protein (143aa)
biopolymer transporter ExbD n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003632D50
Biopolymer transport protein {ECO:0000313|EMBL:GAD23381.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
biopolymer transport protein exbd/tolr
SCNpilot_BF_INOC_scaffold_116_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15186..15848)
DNA (663bp) protein (221aa)
flagellar motor protein MotA n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363606A
Biopolymer transport protein {ECO:0000313|EMBL:GAD23380.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
mota/tolq/exbb proton channel
SCNpilot_BF_INOC_scaffold_116_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15890..16705)
DNA (816bp) protein (272aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TW49_ALIDB
SCNpilot_BF_INOC_scaffold_116_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16768..17316)
DNA (549bp) protein (183aa)
SmpA/OmlA domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1H3_DELAS
SmpA/OmlA domain-containing protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; D
SCNpilot_BF_INOC_scaffold_116_16
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17394..17816
DNA (423bp) protein (141aa)
Fur family transcriptional regulator n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A43D
Fur family transcriptional regulator {ECO:0000313|EMBL:KJA10151.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
Fur family ferric uptake regulator
SCNpilot_BF_INOC_scaffold_116_17
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17835..18794)
DNA (960bp) protein (320aa)
HPr kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; Short=HPrK/P {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.4.- {ECO:0000255|HAMAP-Rule:MF_01249
HPr kinase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003956369
HPr kinase/phosphorylase
SCNpilot_BF_INOC_scaffold_116_18
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18820..19296)
DNA (477bp) protein (159aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9B5_ACIAP
putative PTS IIA-like nitrogen-regulatory protein PtsN
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:ADX48360.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
SCNpilot_BF_INOC_scaffold_116_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19451..20989
DNA (1539bp) protein (513aa)
Ppx/GppA phosphatase (EC:3.6.1.40)
exopolyphosphatase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00038207A0
Exopolyphosphatase {ECO:0000313|EMBL:GAD24842.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_BF_INOC_scaffold_116_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21049..21402
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F9CE7
Uncharacterized protein {ECO:0000313|EMBL:GAD24843.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_BF_INOC_scaffold_116_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21466..21927)
DNA (462bp) protein (154aa)
phosphohistidine phosphatase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000370066A
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:GAD24844.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
phosphohistidine phosphatase SixA
SCNpilot_BF_INOC_scaffold_116_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21927..24140)
DNA (2214bp) protein (738aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase (EC:2.7.4.1)
polyphosphate kinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035EFE53
SCNpilot_BF_INOC_scaffold_116_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24261..24611)
DNA (351bp) protein (117aa)
ribosome hibernation promoting factor n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E40C3
Ribosome-associated protein Y {ECO:0000313|EMBL:GAD23374.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
sigma 54 modulation protein/ribosomal protein S30EA
SCNpilot_BF_INOC_scaffold_116_24
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25007..25924
DNA (918bp) protein (306aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Acidovorax avenae RepID=UPI000307C128
SCNpilot_BF_INOC_scaffold_116_25
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25914..26738)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHJ8_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34707.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
SCNpilot_BF_INOC_scaffold_116_26
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26738..27625)
DNA (888bp) protein (296aa)
thioredoxin n=1 Tax=Acidovorax avenae RepID=UPI000301E842
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ACM34708.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (D
SCNpilot_BF_INOC_scaffold_116_27
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27823..28320
DNA (498bp) protein (166aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B2H2_DELSC
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
SCNpilot_BF_INOC_scaffold_116_28
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28317..29504
DNA (1188bp) protein (396aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHK3_ACIET
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
SCNpilot_BF_INOC_scaffold_116_29
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29508..30506
DNA (999bp) protein (333aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9C7_ALIDK
Sua5/YciO/YrdC/YwlC family protein
SCNpilot_BF_INOC_scaffold_116_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30557..31525
DNA (969bp) protein (323aa)
Lipase n=2 Tax=Alicycliphilus denitrificans RepID=E8TW60_ALIDB
lipase
Lipase {ECO:0000313|EMBL:ADV01834.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus d
Displaying items 1-30 of 349 in total

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