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SCNpilot_BF_INOC_scaffold_139

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Displaying items 31-60 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_139_31
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36431..37024
DNA (594bp) protein (198aa)
Flavoprotein WrbA id=2432499 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
flavodoxin/nitric oxide synthase; K03809 Trp repressor binding protein Tax=GWF1_Rhodobacteraceae_65_7_curated
wrbA; trp repressor binding protein WrbA, putative
SCNpilot_BF_INOC_scaffold_139_32
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37057..38415)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000313C438
MFS transporter {ECO:0000313|EMBL:EXL07953.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Drug resistance transporter EmrB/QacA subfamily
SCNpilot_BF_INOC_scaffold_139_33
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38552..40936
DNA (2385bp) protein (795aa)
RNA binding S1 domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6M2_ACISJ
RNA-binding S1 domain-containing protein
RNA binding S1 domain protein {ECO:0000313|EMBL:ABM41897.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (
SCNpilot_BF_INOC_scaffold_139_34
Marinobacter algicola, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40980..42599)
DNA (1620bp) protein (540aa)
vinylacetyl-CoA delta-isomerase (EC:1.14.13.3)
4-hydroxyphenylacetate 3-hydroxylase family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EZR1_9ALTE
4-hydroxyphenylacetate 3-hydroxylase family protein {ECO:0000313|EMBL:EDM48030.1}; TaxID=443152 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.
SCNpilot_BF_INOC_scaffold_139_35
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42665..43345
DNA (681bp) protein (227aa)
Putative TetR-family transcriptional regulator n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIT1_METPP
TetR family transcriptional regulator
Putative TetR-family transcriptional regulator {ECO:0000313|EMBL:ABM95470.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium pe
SCNpilot_BF_INOC_scaffold_139_36
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43391..44929)
DNA (1539bp) protein (513aa)
Putative fatty-acid--CoA ligase n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0R241_9ACTO
FadD13 {ECO:0000313|EMBL:CCH76984.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
putative acyl-CoA dehydrogenase
SCNpilot_BF_INOC_scaffold_139_37
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44999..46186)
DNA (1188bp) protein (396aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLC1_POLNA
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABM36449.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polarom
SCNpilot_BF_INOC_scaffold_139_38
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46209..46829)
DNA (621bp) protein (207aa)
Glutathione S-transferase n=1 Tax=Thauera sp. 28 RepID=N6ZBZ1_9RHOO
glutathione S-transferase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
glutathione S-transferase
SCNpilot_BF_INOC_scaffold_139_39
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46954..47781
DNA (828bp) protein (276aa)
Transcriptional regulator, IclR family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLJ4_VEREI
hypothetical protein
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABM58501.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="
SCNpilot_BF_INOC_scaffold_139_40
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47870..49045)
DNA (1176bp) protein (392aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364A6A3
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAD23201.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
SCNpilot_BF_INOC_scaffold_139_41
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49091..51190)
DNA (2100bp) protein (700aa)
3-hydroxybutyryl-CoA epimerase (EC:5.1.2.3)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2P5_ACIDE
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:EER61228.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
SCNpilot_BF_INOC_scaffold_139_42
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51497..52912
DNA (1416bp) protein (472aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
glutamine synthetase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036552DA
glutamine synthetase
SCNpilot_BF_INOC_scaffold_139_43
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52928..53764
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLF2_9FIRM
SCNpilot_BF_INOC_scaffold_139_44
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53795..54886
DNA (1092bp) protein (364aa)
ntrB; signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sourc
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP43_RUBGI
SCNpilot_BF_INOC_scaffold_139_45
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54896..56335
DNA (1440bp) protein (480aa)
Nitrogen regulation protein NR(I) n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHQ0_9BURK
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:EHR70312.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
nitrogen metabolism transcriptional regulator NtrC
SCNpilot_BF_INOC_scaffold_139_46
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56436..57104
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMD1_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94168.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
SCNpilot_BF_INOC_scaffold_139_47
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57350..62143
DNA (4794bp) protein (1598aa)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:EIK91884.1}; EC=1.4.7.1 {ECO:0000313|EMBL:EIK91884.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
Glutamate synthase (Ferredoxin) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRP4_9BURK
gltB; Ferredoxin-dependent glutamate synthase
SCNpilot_BF_INOC_scaffold_139_48
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62235..63716
DNA (1482bp) protein (494aa)
Glutamate synthase {ECO:0000313|EMBL:KIO47901.1}; EC=1.4.1.13 {ECO:0000313|EMBL:KIO47901.1};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Ni
Glutamate synthase, NADH/NADPH, small subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2Z7_LEPCP
gltD; glutamate synthase subunit beta
SCNpilot_BF_INOC_scaffold_139_49
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63718..64413)
DNA (696bp) protein (232aa)
mannosyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371FF28
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:GAD23199.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
ABC transporter
SCNpilot_BF_INOC_scaffold_139_50
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64413..65183)
DNA (771bp) protein (257aa)
ABC transporter related n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CNS0_VARPS
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACS19547.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_BF_INOC_scaffold_139_51
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65180..66469)
DNA (1290bp) protein (430aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003652751
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACS19548.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox
SCNpilot_BF_INOC_scaffold_139_52
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66471..67418)
DNA (948bp) protein (316aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TRB3_ACIAC
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABM33501.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_BF_INOC_scaffold_139_53
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67501..68646)
DNA (1146bp) protein (382aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VU5_RHOFD
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
extracellular ligand-binding receptor
SCNpilot_BF_INOC_scaffold_139_54
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68871..70514)
DNA (1644bp) protein (548aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEF90455.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEF90455.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
O-succinylbenzoate--CoA ligase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AX57_DELSC
SCNpilot_BF_INOC_scaffold_139_55
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70676..72142
DNA (1467bp) protein (489aa)
UPF0061 protein Ajs_1677 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6J3_ACISJ
hypothetical protein
UPF0061 protein Ajs_1677 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (s
SCNpilot_BF_INOC_scaffold_139_56
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72139..72552
DNA (414bp) protein (138aa)
peptide methionine sulfoxide reductase MsrB n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F59FB
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:GAD23191.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
methionine-r-sulfoxide reductase
SCNpilot_BF_INOC_scaffold_139_57
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72549..73109
DNA (561bp) protein (187aa)
septation protein A n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003761097
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
intracellular septation protein A
SCNpilot_BF_INOC_scaffold_139_58
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73106..73399
DNA (294bp) protein (98aa)
BolA family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TU26_ALIDB
bola family protein
BolA family protein {ECO:0000313|EMBL:GAO22617.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1
SCNpilot_BF_INOC_scaffold_139_59
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73462..74247
DNA (786bp) protein (262aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
UPI00039ED855 related cluster n=1 Tax=unknown RepID=UPI00039ED855
ppic-type peptidyl-prolyl cis-trans isomerase
SCNpilot_BF_INOC_scaffold_139_60
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74294..75061)
DNA (768bp) protein (256aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003667E7D
Predicted membrane protein {ECO:0000313|EMBL:GAD23187.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-
hypothetical protein
Displaying items 31-60 of 98 in total

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