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SCNpilot_BF_INOC_scaffold_279

Search features with annotation key words

Displaying items 31-60 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_279_31
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46840..48306)
DNA (1467bp) protein (489aa)
Diguanylate cyclase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ44_ALIDB
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADU98978.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
SCNpilot_BF_INOC_scaffold_279_32
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48413..49966)
DNA (1554bp) protein (518aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB42_ACISJ
DEAD/DEAH box helicase domain-containing protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ABM43467.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
SCNpilot_BF_INOC_scaffold_279_33
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50251..50829)
DNA (579bp) protein (193aa)
oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-] id=5079919 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Exonuclease RNase T and DNA polymerase III
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_279_34
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50869..52158
DNA (1290bp) protein (430aa)
ste24 endopeptidase (EC:3.4.24.84)
peptidase M48 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F97D7
Zn-dependent protease with chaperone function {ECO:0000313|EMBL:GAD20630.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
SCNpilot_BF_INOC_scaffold_279_35
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52155..52490
DNA (336bp) protein (112aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=12553176 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
transcriptional coactivator/pterin dehydratase
SCNpilot_BF_INOC_scaffold_279_36
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52487..53428
DNA (942bp) protein (314aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9ME93_ACIET
ribosome small subunit-dependent GTPase a
SCNpilot_BF_INOC_scaffold_279_37
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53480..54460)
DNA (981bp) protein (327aa)
Cobalamin biosynthesis protein CobD n=2 Tax=Alicycliphilus denitrificans RepID=E8TQ35_ALIDB
cobalamin biosynthesis protein cbib
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
SCNpilot_BF_INOC_scaffold_279_38
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54507..55202)
DNA (696bp) protein (232aa)
NUDIX hydrolase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9ME95_ACIET
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACM34134.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY
SCNpilot_BF_INOC_scaffold_279_39
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(55322..55720)
DNA (399bp) protein (133aa)
50S ribosomal protein L19 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003748B9A
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
50S ribosomal protein L19
SCNpilot_BF_INOC_scaffold_279_40
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55820..56575)
DNA (756bp) protein (252aa)
trmD; tRNA (guanine-n(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9ME97_ACIET
SCNpilot_BF_INOC_scaffold_279_41
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56576..57151)
DNA (576bp) protein (192aa)
Ribosome maturation factor RimM n=2 Tax=Alicycliphilus denitrificans RepID=E8TQ31_ALIDB
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
SCNpilot_BF_INOC_scaffold_279_42
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(57223..57474)
DNA (252bp) protein (84aa)
30S ribosomal protein S16 n=1 Tax=Acidovorax sp. NO-1 RepID=H0BY24_9BURK
rpsP; 30S ribosomal protein S16 Tax=GWA2_Burkholderiales_64_37_curated
rpsP; 30S ribosomal protein s16
SCNpilot_BF_INOC_scaffold_279_43
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57609..58055
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036B60EB
Predicted membrane protein {ECO:0000313|EMBL:GAD20619.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-
hypothetical protein
SCNpilot_BF_INOC_scaffold_279_44
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58078..59088)
DNA (1011bp) protein (337aa)
Phosphate transporter n=2 Tax=Acidovorax RepID=A1WB55_ACISJ
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:ABM43480.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain J
SCNpilot_BF_INOC_scaffold_279_45
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59126..59773)
DNA (648bp) protein (216aa)
phosphate transport regulator n=1 Tax=Comamonas sp. B-9 RepID=UPI0003954E9A
phosphate transport regulator
Phosphate transport regulator {ECO:0000313|EMBL:GAO20428.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_BF_INOC_scaffold_279_46
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59951..61198
DNA (1248bp) protein (416aa)
patatin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
patatin id=12549845 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
patatin
SCNpilot_BF_INOC_scaffold_279_47
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61223..62959
DNA (1737bp) protein (579aa)
diguanylate cyclase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958DD2
Diguanylate cyclase {ECO:0000313|EMBL:EFI61526.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_279_48
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


63017..65077
DNA (2061bp) protein (687aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0S4_ALIDB
methionyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_279_49
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65137..66018
DNA (882bp) protein (294aa)
5'-Nucleotidase domain protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X1K6_COMTE
5'-Nucleotidase domain protein {ECO:0000313|EMBL:EED66466.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testos
5'-Nucleotidase-like protein
SCNpilot_BF_INOC_scaffold_279_50
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65985..66899
DNA (915bp) protein (305aa)
5'-nucleotidase-like protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RQ76_COMTE
5'-nucleotidase-like protein {ECO:0000313|EMBL:EHN65542.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testost
5'-nucleotidase
SCNpilot_BF_INOC_scaffold_279_51
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66880..68049)
DNA (1170bp) protein (390aa)
Aminotransferase class I and II n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Z0_ACIDE
Aminotransferase class I and II {ECO:0000313|EMBL:EER61844.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax del
aspartate aminotransferase
SCNpilot_BF_INOC_scaffold_279_52
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68133..69011
DNA (879bp) protein (293aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
competence protein ComJ n=1 Tax=Acidovorax avenae RepID=UPI0002D2AF50
hypothetical protein
SCNpilot_BF_INOC_scaffold_279_53
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69027..69689)
DNA (663bp) protein (221aa)
Rare lipoprotein A n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MD49_ACIET
rare lipoprotein a
Rare lipoprotein A {ECO:0000313|EMBL:ACM32081.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
SCNpilot_BF_INOC_scaffold_279_54
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69689..70528)
DNA (840bp) protein (280aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
5,10-methylenetetrahydrofolate reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BC33A
SCNpilot_BF_INOC_scaffold_279_55
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70541..71968)
DNA (1428bp) protein (476aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000255|HAMAP-Rule:MF_00563}; EC=3.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00563};; S-adenosyl-L-homocysteine hydrolase {ECO:0000255|HAMAP-Rule:MF_00563}; Short=AdoHcyase {ECO:000
Adenosylhomocysteinase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=SAHH_ACIAC
SCNpilot_BF_INOC_scaffold_279_56
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72229..73854
DNA (1626bp) protein (542aa)
Peptide chain release factor 3 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G640_ALIDK
peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1603291 species="Bacteria; Proteobacteria; Betapro
SCNpilot_BF_INOC_scaffold_279_57
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73895..76315)
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XQG7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41704.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_BF_INOC_scaffold_279_58
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76380..76727
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4U4_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20323.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_BF_INOC_scaffold_279_59
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76742..77695
DNA (954bp) protein (318aa)
Glycosyl transferase family 2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5V3_ACIDE
Glycosyl transferase family 2 {ECO:0000313|EMBL:KJA11243.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temper
glycosyl transferase family protein
SCNpilot_BF_INOC_scaffold_279_60
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77695..78489
DNA (795bp) protein (265aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5V5_ACIDE
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EER60153.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
HAD superfamily hydrolase
Displaying items 31-60 of 105 in total

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