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SCNpilot_BF_INOC_scaffold_279

Search features with annotation key words

Displaying items 61-90 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_279_61
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78532..79281)
DNA (750bp) protein (250aa)
arginine ABC transporter ATP-binding protein n=1 Tax=Brachymonas chironomi RepID=UPI000373F70B
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADU35073.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax par
SCNpilot_BF_INOC_scaffold_279_62
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79301..79969)
DNA (669bp) protein (223aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3H4_ACIAP
polar amino acid ABC transporter permease
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADX47876.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.
SCNpilot_BF_INOC_scaffold_279_63
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79971..80729)
DNA (759bp) protein (253aa)
glutamate ABC transporter permease n=1 Tax=Brachymonas chironomi RepID=UPI00037F2F2E
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADU98463.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphi
SCNpilot_BF_INOC_scaffold_279_64
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81001..81897)
DNA (897bp) protein (299aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AFAB2
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACM32068.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
SCNpilot_BF_INOC_scaffold_279_65
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82095..83141)
DNA (1047bp) protein (349aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000255|HAMAP-Rule:MF_00219}; Short=DHOase {ECO:0000255|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000255|HAMAP-Rule:MF_00219};; TaxID=232721 species="Bacteria; Proteobacteria; Betapr
Dihydroorotase n=1 Tax=Acidovorax sp. (strain JS42) RepID=PYRC_ACISJ
SCNpilot_BF_INOC_scaffold_279_66
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83138..83485)
DNA (348bp) protein (116aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
Arsenate reductase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF51_ACIET
arsenate reductase
SCNpilot_BF_INOC_scaffold_279_67
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83503..84840)
DNA (1338bp) protein (446aa)
Allantoinase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT41_9BURK
Allantoinase {ECO:0000313|EMBL:EHL24456.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
amidohydrolase
SCNpilot_BF_INOC_scaffold_279_68
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84863..85825)
DNA (963bp) protein (321aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000255|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000255|HAMAP-Rule:MF_00001}; Short=ATCase {ECO:0000255
Aspartate carbamoyltransferase n=2 Tax=Acidovorax RepID=PYRB_ACIET
SCNpilot_BF_INOC_scaffold_279_69
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85822..86346)
DNA (525bp) protein (175aa)
Phosphoribosyltransferase n=2 Tax=Acidovorax RepID=A1WBQ8_ACISJ
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACM34328.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (s
SCNpilot_BF_INOC_scaffold_279_70
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86343..86762)
DNA (420bp) protein (140aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=232721 specie
Putative Holliday junction resolvase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBQ9_ACISJ
Holliday junction resolvase-like protein
SCNpilot_BF_INOC_scaffold_279_71
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86759..87394)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D8E1A
UPF0301 protein AVS7_03497 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_279_72
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87437..93403)
DNA (5967bp) protein (1989aa)
UPI00039A255D related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00039A255D
CheA signal transduction histidine kinase; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
CheA signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_279_73
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93448..95670)
DNA (2223bp) protein (741aa)
chemotaxis protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003664468
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:GAD23739.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
methyl-accepting chemotaxis sensory transducer
SCNpilot_BF_INOC_scaffold_279_74
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95705..96232)
DNA (528bp) protein (176aa)
Putative CheW protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBR3_ACISJ
putative CheW protein
Putative CheW protein {ECO:0000313|EMBL:ABM43688.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain J
SCNpilot_BF_INOC_scaffold_279_75
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96252..96617)
DNA (366bp) protein (122aa)
response regulator receiver protein
response regulator receiver protein; K02658 twitching motility two-component system response regulator PilH id=12550037 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
response regulator receiver protein; K02658 twitching motility two-component system response regulator PilH Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_BF_INOC_scaffold_279_76
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96617..97021)
DNA (405bp) protein (135aa)
Response regulator receiver protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF65_ACIET
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEB86205.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_BF_INOC_scaffold_279_77
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97275..98585
DNA (1311bp) protein (437aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370E6E9
glutamate-1-semialdehyde-2,1-aminomutase
SCNpilot_BF_INOC_scaffold_279_78
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98615..99595)
DNA (981bp) protein (327aa)
Putative amino-acid metabolite efflux pump n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKU4_RUBGI
putative amino-acid metabolite efflux pump
Putative amino-acid metabolite efflux pump {ECO:0000313|EMBL:BAL93631.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatino
SCNpilot_BF_INOC_scaffold_279_79
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99534..101135)
DNA (1602bp) protein (534aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF71_ACIET
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
SCNpilot_BF_INOC_scaffold_279_80
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101224..101463)
DNA (240bp) protein (80aa)
DNA-binding protein Fis n=2 Tax=Acidovorax RepID=A1TKK5_ACIAC
DNA-binding protein Fis
DNA-binding protein Fis {ECO:0000313|EMBL:ABM31493.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
SCNpilot_BF_INOC_scaffold_279_81
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101460..102512)
DNA (1053bp) protein (351aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
tRNA-dihydrouridine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF73_ACIET
tim-barrel protein, nifr3 family
SCNpilot_BF_INOC_scaffold_279_82
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102625..103092
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9F7_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX44764.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (str
SCNpilot_BF_INOC_scaffold_279_83
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103236..104219
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003181A42
Sulfate and thiosulfate binding protein CysP
Sulfate and thiosulfate binding protein CysP {ECO:0000313|EMBL:CDM24473.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_BF_INOC_scaffold_279_84
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104228..105091
DNA (864bp) protein (288aa)
Sulfate ABC transporter, permease protein CysT n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS59_PUSST
Sulfate transport system permease protein CysT
Sulfate transport system permease protein CysT {ECO:0000313|EMBL:CDM24472.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_BF_INOC_scaffold_279_85
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105088..105927
DNA (840bp) protein (280aa)
Sulfate ABC transporter permease (Fragment) n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HTJ8_9BURK
Sulfate transport system permease protein CysW
Sulfate transport system permease protein CysW {ECO:0000313|EMBL:CDM24471.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_BF_INOC_scaffold_279_86
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105924..107006
DNA (1083bp) protein (361aa)
Sulfate and thiosulfate import ATP-binding protein CysA (EC:3.6.3.25)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701, ECO:0000313|EMBL:CDM24470.1};; Sulfate-transporting ATPase {ECO:000
Sulfate/thiosulfate import ATP-binding protein CysA n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DVX8_9BURK
SCNpilot_BF_INOC_scaffold_279_87
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107209..109692
DNA (2484bp) protein (828aa)
Nitrite reductase (NAD(P)H), large subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ84_ALIDB
Nitrite reductase (NAD(P)H), large subunit {ECO:0000313|EMBL:ADV00126.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
nitrite reductase (nad(p)h), large subunit
SCNpilot_BF_INOC_scaffold_279_88
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109778..110161
DNA (384bp) protein (128aa)
nitrite reductase (NAD(P)H) small subunit; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] id=12553848 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
nitrite reductase (NAD(P)H) small subunit; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
nitrite reductase (NAD(P)H) small subunit
SCNpilot_BF_INOC_scaffold_279_89
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110359..112200
DNA (1842bp) protein (614aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRN
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV72_PUSST
sulfite reductase flavoprotein
SCNpilot_BF_INOC_scaffold_279_90
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112273..113988
DNA (1716bp) protein (572aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8Z7_9GAMM
sulfite reductase (NADPH) hemoprotein subunit beta
Displaying items 61-90 of 105 in total

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