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SCNpilot_BF_INOC_scaffold_302

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_302_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109..930)
DNA (822bp) protein (274aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
peptidyl-prolyl cis-trans isomerase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F9F8B
PpiC-type peptidyl-prolyl cis-trans isomerase
SCNpilot_BF_INOC_scaffold_302_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(992..1720)
DNA (729bp) protein (243aa)
respiratory nitrate reductase subunit gamma (EC:1.7.99.4)
Respiratory nitrate reductase, gamma subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3Q9_ALIDK
Respiratory nitrate reductase subunit gamma {ECO:0000313|EMBL:GAO26201.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
SCNpilot_BF_INOC_scaffold_302_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1717..2415)
DNA (699bp) protein (233aa)
nitrate reductase molybdenum cofactor assembly chaperone (EC:1.7.99.4)
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:AEB82886.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEB82886.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria;
Nitrate reductase molybdenum cofactor assembly chaperone n=2 Tax=Alicycliphilus denitrificans RepID=E8TWE3_ALIDB
SCNpilot_BF_INOC_scaffold_302_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2427..3032)
DNA (606bp) protein (202aa)
Nitrate reductase, beta subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TWE2_ALIDB
nitrate reductase subunit beta
Respiratory nitrate reductase subunit beta {ECO:0000313|EMBL:GAO26199.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
SCNpilot_BF_INOC_scaffold_302_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3029..3880)
DNA (852bp) protein (284aa)
nitrate reductase subunit beta (EC:1.7.99.4)
Respiratory nitrate reductase beta subunit n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W363_ACISJ
Respiratory nitrate reductase beta subunit {ECO:0000313|EMBL:ABM40688.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_BF_INOC_scaffold_302_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3896..7687)
DNA (3792bp) protein (1264aa)
Respiratory nitrate reductase alpha subunit apoprotein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W362_ACISJ
respiratory nitrate reductase subunit alpha apoprotein
Respiratory nitrate reductase alpha subunit apoprotein {ECO:0000313|EMBL:ABM40687.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
SCNpilot_BF_INOC_scaffold_302_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7740..9185)
DNA (1446bp) protein (482aa)
nitrate transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003718F88
Nitrate/nitrite transporter {ECO:0000313|EMBL:GAD23003.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR
nitrite transporter
SCNpilot_BF_INOC_scaffold_302_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9218..10576)
DNA (1359bp) protein (453aa)
Major facilitator superfamily MFS_1 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWD9_ALIDB
Nitrite/nitrate transporter protein {ECO:0000313|EMBL:GAO26196.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
major facilitator superfamily protein
SCNpilot_BF_INOC_scaffold_302_9
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10647..11792
DNA (1146bp) protein (382aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4S9_ACIDE
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KGM52287.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacte
c4-dicarboxylate transporter/malic acid transport protein
SCNpilot_BF_INOC_scaffold_302_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11783..12442)
DNA (660bp) protein (220aa)
Response regulator receiver n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWD8_ALIDB
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:ADU98276.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_BF_INOC_scaffold_302_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12446..14386)
DNA (1941bp) protein (647aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Multi-sensor signal transduction histidine kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3Q2_ALIDK
multi-sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_302_12
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14442..15137
DNA (696bp) protein (232aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HA
Molybdenum cofactor guanylyltransferase n=1 Tax=Acidovorax sp. CF316 RepID=J1ERU3_9BURK
mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA
SCNpilot_BF_INOC_scaffold_302_13
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15176..16798)
DNA (1623bp) protein (541aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QR2_RHOFD
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABD71891.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax
SCNpilot_BF_INOC_scaffold_302_14
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16811..18049)
DNA (1239bp) protein (413aa)
thiolase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348B770
thiolase
Thiolase {ECO:0000313|EMBL:ABD71892.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC
SCNpilot_BF_INOC_scaffold_302_15
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18131..19246)
DNA (1116bp) protein (372aa)
Saccharopine dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QR0_RHOFD
saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:ABD71893.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrired
SCNpilot_BF_INOC_scaffold_302_16
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19277..20512)
DNA (1236bp) protein (412aa)
Acyl-CoA dehydrogenase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QQ9_RHOFD
acyl-CoA dehydrogenase-like protein
Acyl-CoA dehydrogenase-like {ECO:0000313|EMBL:ABD71894.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrire
SCNpilot_BF_INOC_scaffold_302_17
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20702..23410
DNA (2709bp) protein (903aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QQ8_RHOFD
ATP-dependent transcription regulator LuxR
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:ABD71895.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhod
SCNpilot_BF_INOC_scaffold_302_18
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23451..24470)
DNA (1020bp) protein (340aa)
aminotransferase (EC:2.6.1.-); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=GWA2_Curvibacter_64_110_curated
PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase n=1 Tax=Polaromonas sp. CF318 RepID=J3CYD1_9BURK
putative pyridoxal phosphate-dependent transferase
SCNpilot_BF_INOC_scaffold_302_19
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24464..25459)
DNA (996bp) protein (332aa)
cobalamin biosynthesis protein CobD n=1 Tax=Acidovorax radicis RepID=UPI00023770BE
cobalamin biosynthesis protein cobd Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
cobalamin biosynthesis protein cobd
SCNpilot_BF_INOC_scaffold_302_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25459..25986)
DNA (528bp) protein (176aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Methylated-DNA/protein-cysteine methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U028_ALIDB
methylated-DNA--protein-cysteine methyltransferase
SCNpilot_BF_INOC_scaffold_302_21
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26141..26509
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSW9_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36021.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
SCNpilot_BF_INOC_scaffold_302_22
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26521..27045
DNA (525bp) protein (175aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUL2_9BURK
sigma-24 (FecI-like protein); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Curvibacter_64_110_curated
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_BF_INOC_scaffold_302_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27067..27870
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WGV1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37405.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
putative transmembrane anti-sigma factor
SCNpilot_BF_INOC_scaffold_302_24
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27878..28459)
DNA (582bp) protein (194aa)
Cob(I)alamin adenosyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1G3_9BURK
ATP:corrinoid adenosyltransferase
ATP:corrinoid adenosyltransferase {ECO:0000313|EMBL:BAO80284.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacteriu
SCNpilot_BF_INOC_scaffold_302_25
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28449..29231)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B56D8
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:EJE50060.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
ABC transporter-like protein
SCNpilot_BF_INOC_scaffold_302_26
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29228..30301)
DNA (1074bp) protein (358aa)
Transport system permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG89_9BURK
Transport system permease {ECO:0000313|EMBL:EIK88229.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga s
transport system permease
SCNpilot_BF_INOC_scaffold_302_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30342..31229)
DNA (888bp) protein (296aa)
cobalamin ABC transporter periplasmic protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein id=5081272 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
periplasmic binding protein
SCNpilot_BF_INOC_scaffold_302_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31226..31819)
DNA (594bp) protein (198aa)
adenosylcobinamide kinase (EC:2.7.1.156)
adenosylcobinamide-phosphate guanylyltransferase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00037585A2
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase {ECO:0000313|EMBL:GAD22243.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
SCNpilot_BF_INOC_scaffold_302_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31824..33671)
DNA (1848bp) protein (616aa)
TonB-dependent receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6C2_9BURK
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_302_30
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34029..34247
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003604264
Uncharacterized protein {ECO:0000313|EMBL:GAD22246.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
Displaying items 1-30 of 55 in total

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