ggKbase home page

SCNpilot_BF_INOC_scaffold_335

Search features with annotation key words

Displaying items 61-86 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_335_61
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61500..62552
DNA (1053bp) protein (351aa)
alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
Blr3675 protein id=2033358 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
alcohol dehydrogenase
SCNpilot_BF_INOC_scaffold_335_62
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62594..64192
DNA (1599bp) protein (533aa)
ABC transporter solute-binding protein id=2033356 bin=GWB2_Geobacter-like_52_12 species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_335_63
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64325..65206
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component id=2033354 bin=GWB2_Geobacter-like_52_12 species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_335_64
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65203..66051
DNA (849bp) protein (283aa)
ABC transporter permease protein id=2033353 bin=GWB2_Geobacter-like_52_12 species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter permease Tax=GWB2_Geobacteraceae_52_12_curated
ABC transporter permease
SCNpilot_BF_INOC_scaffold_335_65
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66063..67145
DNA (1083bp) protein (361aa)
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT id=2033352 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
sugar ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein Tax=GWB2_Geobacteraceae_52_12_curated
sugar ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_335_66
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67142..68197
DNA (1056bp) protein (352aa)
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT id=2033351 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
sugar ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein Tax=GWB2_Geobacteraceae_52_12_curated
sugar ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_335_67
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68248..69363)
DNA (1116bp) protein (372aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ07_ALIDB
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADU98941.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" s
SCNpilot_BF_INOC_scaffold_335_68
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69497..70678)
DNA (1182bp) protein (394aa)
Acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. CF316 RepID=J0KI43_9BURK
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJE53315.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;
SCNpilot_BF_INOC_scaffold_335_69
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70755..71417)
DNA (663bp) protein (221aa)
UPF0502 protein Ajs_3392 n=1 Tax=Acidovorax sp. (strain JS42) RepID=Y3392_ACISJ
hypothetical protein
UPF0502 protein Ajs_3392 {ECO:0000255|HAMAP-Rule:MF_01584}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (s
SCNpilot_BF_INOC_scaffold_335_70
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71439..72014
DNA (576bp) protein (192aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB86_ACISJ
purN; phosphoribosylglycinamide formyltransferase
SCNpilot_BF_INOC_scaffold_335_71
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72071..73342
DNA (1272bp) protein (424aa)
Fmu (Sun) domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE77_ALIDK
Fmu (Sun) domain-containing protein
Fmu (Sun) domain protein {ECO:0000313|EMBL:AEB86039.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus de
SCNpilot_BF_INOC_scaffold_335_72
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73355..74377)
DNA (1023bp) protein (341aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122U8_POLSJ
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE46444.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaro
SCNpilot_BF_INOC_scaffold_335_73
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74408..76189
DNA (1782bp) protein (594aa)
Glyoxylate carboligase {ECO:0000313|EMBL:KEH12375.1}; EC=4.1.1.47 {ECO:0000313|EMBL:KEH12375.1};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; D
glyoxylate carboligase n=1 Tax=Acidovorax radicis RepID=UPI0002376D4E
glyoxylate carboligase
SCNpilot_BF_INOC_scaffold_335_74
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76203..76982
DNA (780bp) protein (260aa)
hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;
Hydroxypyruvate isomerase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYM0_THIK1
SCNpilot_BF_INOC_scaffold_335_75
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77011..77922
DNA (912bp) protein (304aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXP9_ALIDB
Tartronate semialdehyde reductase {ECO:0000313|EMBL:KJS30534.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="
SCNpilot_BF_INOC_scaffold_335_76
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77937..79202
DNA (1266bp) protein (422aa)
hydroxypyruvate reductase (EC:1.1.1.81)
Hydroxypyruvate reductase {ECO:0000313|EMBL:ACB33401.1}; EC=1.1.1.81 {ECO:0000313|EMBL:ACB33401.1};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;"
Hydroxypyruvate reductase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y407_LEPCP
SCNpilot_BF_INOC_scaffold_335_77
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79219..80640
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ali
pykA2; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LN74_RALME
SCNpilot_BF_INOC_scaffold_335_78
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80725..82038)
DNA (1314bp) protein (438aa)
AAA ATPase central domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ19_ALIDB
ATPase AAA
AAA ATPase central domain protein {ECO:0000313|EMBL:ADU98953.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
SCNpilot_BF_INOC_scaffold_335_79
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82113..82709
DNA (597bp) protein (199aa)
Uracil-DNA glycosylase family protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VNE4_9GAMM
uracil-DNA glycosylase
Uracil-DNA glycosylase family protein {ECO:0000313|EMBL:CBL46336.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
SCNpilot_BF_INOC_scaffold_335_80
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82845..83516)
DNA (672bp) protein (224aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
phosphoglycolate phosphatase (EC:3.1.3.18)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A8B59
SCNpilot_BF_INOC_scaffold_335_81
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83513..84226)
DNA (714bp) protein (238aa)
bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase (EC:2.1.1.64) Tax=GWE1_Burkholderiales_65_30_curated
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase id=1262648 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ubiG; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
SCNpilot_BF_INOC_scaffold_335_82
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84429..85601
DNA (1173bp) protein (391aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=2 Tax=Acidovorax RepID=A1W8H8_ACISJ
carbamoyl-phosphate synthase small subunit
SCNpilot_BF_INOC_scaffold_335_83
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85618..85995
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8H7_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42552.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
SCNpilot_BF_INOC_scaffold_335_84
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86008..89286
DNA (3279bp) protein (1093aa)
carbamoyl-phosphate synthase large subunit (EC:6.3.4.16)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; B
carbamoyl phosphate synthase large subunit n=1 Tax=Acidovorax avenae RepID=UPI0002DF16D1
SCNpilot_BF_INOC_scaffold_335_85
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89346..90056)
DNA (711bp) protein (237aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Carbonic anhydrase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR90_NITHX
carbonic anhydrase
SCNpilot_BF_INOC_scaffold_335_86
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90153..90653
DNA (501bp) protein (167aa)
small integral membrane protein (EC:3.6.1.3)
membrane protein n=1 Tax=Pseudomonas sp. PAMC 25886 RepID=UPI000287DDB6
Putative membrane protein {ECO:0000313|EMBL:KIH85626.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batu
Displaying items 61-86 of 86 in total

View Taxonomy