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SCNpilot_BF_INOC_scaffold_375

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_375_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243..806)
DNA (564bp) protein (188aa)
Transposase IS4 family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2H5_THIK1
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADG31308.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12)
SCNpilot_BF_INOC_scaffold_375_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(745..1224)
DNA (480bp) protein (160aa)
Transposase IS4 family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZK4_THIK1
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADG32402.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12)
SCNpilot_BF_INOC_scaffold_375_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1380..2657
DNA (1278bp) protein (426aa)
HI0933 family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQX2_ALIDB
hi0933 family protein
Hi0933 family protein {ECO:0000313|EMBL:GAO23085.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
SCNpilot_BF_INOC_scaffold_375_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2766..3755
DNA (990bp) protein (330aa)
CheW protein id=12551066 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
CheW protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
CheW protein
SCNpilot_BF_INOC_scaffold_375_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3769..4569)
DNA (801bp) protein (267aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Enoyl-[acyl-carrier-protein] reductase [NADH] n=3 Tax=Comamonas testosteroni RepID=D0J640_COMT2
short-chain dehydrogenase/reductase SDR
SCNpilot_BF_INOC_scaffold_375_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4614..6413
DNA (1800bp) protein (600aa)
Extracellular solute-binding protein family 5 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTD9_ALIDB
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADV00413.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ali
SCNpilot_BF_INOC_scaffold_375_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6445..7428
DNA (984bp) protein (328aa)
hypothetical protein; K09781 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein; K09781 hypothetical protein id=12553218 bin=BDI species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_375_8
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7425..8081
DNA (657bp) protein (219aa)
Type III restriction system methylase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2H5_ACISJ
type III restriction system methylase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
type III restriction system methylase
SCNpilot_BF_INOC_scaffold_375_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8190..8714
DNA (525bp) protein (175aa)
Plasmid maintenance system antidote protein, XRE family n=3 Tax=Delftia RepID=F6AKU8_DELSC
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:KEH07392.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsur
SCNpilot_BF_INOC_scaffold_375_10

Not on your lists

8728..9879
DNA (1152bp) protein (384aa)
DNA-binding protein n=2 Tax=mine drainage metagenome RepID=T1BWF4_9ZZZZ
DNA-binding protein {ECO:0000313|EMBL:EQD77281.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_375_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9876..10370
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036AF1A5
Uncharacterized protein {ECO:0000313|EMBL:GAD22284.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_BF_INOC_scaffold_375_12
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10367..11965
DNA (1599bp) protein (533aa)
Restriction-modification system, predicted endonuclease-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1K2_RAMTT
restriction-modification system, putative endonuclease
Restriction-modification system, predicted endonuclease-like protein {ECO:0000313|EMBL:AEG91064.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
SCNpilot_BF_INOC_scaffold_375_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11949..14492
DNA (2544bp) protein (848aa)
Type III restriction system endonuclease, putative n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2H8_ACISJ
type III restriction system endonuclease
Type III restriction system endonuclease, putative {ECO:0000313|EMBL:ABM40453.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sou
SCNpilot_BF_INOC_scaffold_375_14
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14510..17056)
DNA (2547bp) protein (849aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036A9FDC
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_375_15
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17073..18695)
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036B126A
NADH dehydrogenase subunit L
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_BF_INOC_scaffold_375_16
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18729..19670
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036F18FC
LysR family transcriptional regulator
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_BF_INOC_scaffold_375_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19738..20772
DNA (1035bp) protein (345aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Y0_9BURK
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AFU46672.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
SCNpilot_BF_INOC_scaffold_375_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20781..21824
DNA (1044bp) protein (348aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTD6_ALIDB
binding-protein-dependent transport system inner membrane protein
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:GAO22857.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphil
SCNpilot_BF_INOC_scaffold_375_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21824..23449
DNA (1626bp) protein (542aa)
ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTD5_ALIDB
ABC transporter
ABC transporter {ECO:0000313|EMBL:GAO22858.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_BF_INOC_scaffold_375_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23464..24330)
DNA (867bp) protein (289aa)
universal stress protein UspA n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B6DD9
Universal stress protein UspA and related nucleotide-binding proteins {ECO:0000313|EMBL:GAD24032.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
UspA domain-containing protein
SCNpilot_BF_INOC_scaffold_375_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24420..25487)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC9_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00403.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_BF_INOC_scaffold_375_22

Not on your lists

comp(25636..26676)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00036EE38D
Lipoprotein {ECO:0000313|EMBL:EQD47596.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_375_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27002..29881
DNA (2880bp) protein (960aa)
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:AEB85373.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AEB85373.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC8_ALIDB
SCNpilot_BF_INOC_scaffold_375_24
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29967..31220
DNA (1254bp) protein (418aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase (EC:2.3.1.61)
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXI4_9BURK
SCNpilot_BF_INOC_scaffold_375_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31291..32718
DNA (1428bp) protein (476aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003757BA1
SCNpilot_BF_INOC_scaffold_375_26
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32807..33889
DNA (1083bp) protein (361aa)
AFG1-family ATPase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC5_ALIDB
AFG1 family ATPase
ATPase protein {ECO:0000313|EMBL:GAO22867.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_BF_INOC_scaffold_375_27
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33895..34701)
DNA (807bp) protein (269aa)
Protein phosphatase 2C domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC3_ALIDB
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KJA09121.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
protein phosphatase 2C
SCNpilot_BF_INOC_scaffold_375_28
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34711..35508)
DNA (798bp) protein (266aa)
Outer membrane protein assembly factor BamD n=2 Tax=Acidovorax RepID=A1W6Z1_ACISJ
hypothetical protein
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
SCNpilot_BF_INOC_scaffold_375_29
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35683..36282
DNA (600bp) protein (200aa)
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000313|EMBL:CBJ36469.1}; EC=3.6.1.27 {ECO:0000313|EMBL:CBJ36469.1};; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiac
Undecaprenyl-diphosphatase n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8N4F9_RALSL
SCNpilot_BF_INOC_scaffold_375_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36333..39875
DNA (3543bp) protein (1181aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSQ8_ALIDB
Displaying items 1-30 of 40 in total

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