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SCNpilot_BF_INOC_scaffold_425

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_425_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65..1759)
-----------------
DNA (1695bp)
protein (565aa)
Primase 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5Q5_9BURK
primase 2
Primase 2 {ECO:0000313|EMBL:AFU46524.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_BF_INOC_scaffold_425_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2125..2358)
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6Q1_ACISJ
Uncharacterized protein {ECO:0000313|EMBL:GAO21239.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein
SCNpilot_BF_INOC_scaffold_425_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2465..2788
-----------------
DNA (324bp)
protein (108aa)
Transposase IS911 HTH and LZ region n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q81ZQ0_NITEU
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:CDM25187.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cast
SCNpilot_BF_INOC_scaffold_425_4
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2785..3708
-----------------
DNA (924bp)
protein (308aa)
Integrase, catalytic region n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4H4_ACISJ
Transposase {ECO:0000313|EMBL:KEH09016.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
integrase catalytic subunit
SCNpilot_BF_INOC_scaffold_425_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3845..4726)
-----------------
DNA (882bp)
protein (294aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVT0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99475.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_BF_INOC_scaffold_425_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5186..5464)
-----------------
DNA (279bp)
protein (93aa)
Transcriptional regulator, XRE family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZW7_THIK1
XRE family transcriptional regulator Tax=CG_Rhodof_04
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_425_7
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5461..5784)
-----------------
DNA (324bp)
protein (108aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZW8_THIK1
phage-related protein
Phage-related protein {ECO:0000313|EMBL:BAO83139.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
SCNpilot_BF_INOC_scaffold_425_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5806..6471)
-----------------
DNA (666bp)
protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO26165.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_BF_INOC_scaffold_425_9

Not on your lists

comp(6468..7823)
-----------------
DNA (1356bp)
protein (452aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D0U9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98935.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phage integrase family protein
SCNpilot_BF_INOC_scaffold_425_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8106..8924)
-----------------
DNA (819bp)
protein (273aa)
Alpha/beta hydrolase fold protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXL8_ALIDB
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEB83787.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
SCNpilot_BF_INOC_scaffold_425_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8945..10504)
-----------------
DNA (1560bp)
protein (520aa)
lytic transglycosylase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368D11F
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:GAD23986.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
lytic transglycosylase subunit
SCNpilot_BF_INOC_scaffold_425_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10501..11229)
-----------------
DNA (729bp)
protein (243aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1603291 species="Bacteria; Pro
Hydroxyacylglutathione hydrolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVT5_ALIDB
hydroxyacylglutathione hydrolase
SCNpilot_BF_INOC_scaffold_425_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11276..12079
-----------------
DNA (804bp)
protein (268aa)
UPI0003D3F1EC related cluster n=1 Tax=unknown RepID=UPI0003D3F1EC
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAD23988.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
type 11 methyltransferase
SCNpilot_BF_INOC_scaffold_425_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12097..12540
-----------------
DNA (444bp)
protein (148aa)
Ribonuclease H {ECO:0000255|HAMAP-Rule:MF_00042}; Short=RNase H {ECO:0000255|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00042};; TaxID=232721 species="Bacteria; Proteobacteria; Beta
Ribonuclease H n=1 Tax=Acidovorax sp. (strain JS42) RepID=RNH_ACISJ
rnhA; ribonuclease H
SCNpilot_BF_INOC_scaffold_425_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12635..14893)
-----------------
DNA (2259bp)
protein (753aa)
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein id=12553311 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor
SCNpilot_BF_INOC_scaffold_425_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15142..16863
-----------------
DNA (1722bp)
protein (574aa)
nitrite reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037120F7
Hydroxylamine reductase {ECO:0000313|EMBL:GAD22027.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
nirS; nitrite reductase (NO-forming) NirS
SCNpilot_BF_INOC_scaffold_425_17
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17001..17753)
-----------------
DNA (753bp)
protein (251aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003778C5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47278.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_425_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17792..18622)
-----------------
DNA (831bp)
protein (277aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CF236
iron permease FTR1 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
iron permease FTR1
SCNpilot_BF_INOC_scaffold_425_19
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18635..18961)
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036FAE71
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26761.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_BF_INOC_scaffold_425_20
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19306..19680)
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTN0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20986.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
SCNpilot_BF_INOC_scaffold_425_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19710..20339)
-----------------
DNA (630bp)
protein (210aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01218}; EC=2.4.2.9 {ECO:0000255|HAMAP-Rule:MF_01218};; UMP pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000255|HAMAP-R
Uracil phosphoribosyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=UPP_ACISJ
SCNpilot_BF_INOC_scaffold_425_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20357..21322)
-----------------
DNA (966bp)
protein (322aa)
Threo-3-hydroxyaspartate ammonia-lyase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXL8_9BURK
Threo-3-hydroxyaspartate ammonia-lyase {ECO:0000313|EMBL:EHL22828.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
pyridoxal-5'-phosphate-dependent enzyme subunit beta
SCNpilot_BF_INOC_scaffold_425_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21410..22927)
-----------------
DNA (1518bp)
protein (506aa)
Putative hydrolase {ECO:0000313|EMBL:EIK92471.1}; EC=3.6.1.15 {ECO:0000313|EMBL:EIK92471.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydro
Putative hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTD1_9BURK
hypothetical protein
SCNpilot_BF_INOC_scaffold_425_24
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22991..23710
-----------------
DNA (720bp)
protein (240aa)
Probable transcriptional regulatory protein CtCNB1_2899 n=3 Tax=Comamonas testosteroni RepID=D0J0H4_COMT2
hypothetical protein
Probable transcriptional regulatory protein P245_03805 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;"
SCNpilot_BF_INOC_scaffold_425_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23793..25067
-----------------
DNA (1275bp)
protein (425aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0F4_ALIDB
SCNpilot_BF_INOC_scaffold_425_26
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25064..26002
-----------------
DNA (939bp)
protein (313aa)
coproporphyrinogen oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Acidovorax sp. CF316 RepID=J1EBZ7_9BURK
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprop
SCNpilot_BF_INOC_scaffold_425_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26104..26784
-----------------
DNA (681bp)
protein (227aa)
Ribosomal silencing factor RsfS n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0F6_ALIDB
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
SCNpilot_BF_INOC_scaffold_425_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26797..27264
-----------------
DNA (468bp)
protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
50S rRNA methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000373FA20
hypothetical protein
SCNpilot_BF_INOC_scaffold_425_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27326..28153)
-----------------
DNA (828bp)
protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV2_9BURK
ABC transporter permease
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_425_30
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28160..28972)
-----------------
DNA (813bp)
protein (271aa)
NitT family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV3_9BURK
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying items 1-30 of 44 in total

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