name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_BF_INOC_scaffold_425_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(65..1759)
----------------- DNA (1695bp) protein (565aa) |
Primase 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5Q5_9BURK
primase 2
Primase 2 {ECO:0000313|EMBL:AFU46524.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
|
|
SCNpilot_BF_INOC_scaffold_425_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2125..2358)
----------------- DNA (234bp) protein (78aa) |
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6Q1_ACISJ
Uncharacterized protein {ECO:0000313|EMBL:GAO21239.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein
|
|
SCNpilot_BF_INOC_scaffold_425_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2465..2788
----------------- DNA (324bp) protein (108aa) |
Transposase IS911 HTH and LZ region n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q81ZQ0_NITEU
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:CDM25187.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cast
|
|
SCNpilot_BF_INOC_scaffold_425_4
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2785..3708
----------------- DNA (924bp) protein (308aa) |
Integrase, catalytic region n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4H4_ACISJ
Transposase {ECO:0000313|EMBL:KEH09016.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
integrase catalytic subunit
|
|
SCNpilot_BF_INOC_scaffold_425_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3845..4726)
----------------- DNA (882bp) protein (294aa) |
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVT0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99475.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
|
|
SCNpilot_BF_INOC_scaffold_425_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5186..5464)
----------------- DNA (279bp) protein (93aa) |
Transcriptional regulator, XRE family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZW7_THIK1
XRE family transcriptional regulator Tax=CG_Rhodof_04
XRE family transcriptional regulator
|
|
SCNpilot_BF_INOC_scaffold_425_7
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5461..5784)
----------------- DNA (324bp) protein (108aa) |
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZW8_THIK1
phage-related protein
Phage-related protein {ECO:0000313|EMBL:BAO83139.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
|
|
SCNpilot_BF_INOC_scaffold_425_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5806..6471)
----------------- DNA (666bp) protein (222aa) |
Uncharacterized protein {ECO:0000313|EMBL:GAO26165.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
|
|
SCNpilot_BF_INOC_scaffold_425_9
uncultured bacterium, Bacteria
|
Not on your lists |
comp(6468..7823)
----------------- DNA (1356bp) protein (452aa) |
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D0U9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98935.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phage integrase family protein
|
|
SCNpilot_BF_INOC_scaffold_425_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8106..8924)
----------------- DNA (819bp) protein (273aa) |
Alpha/beta hydrolase fold protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXL8_ALIDB
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEB83787.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
|
|
SCNpilot_BF_INOC_scaffold_425_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8945..10504)
----------------- DNA (1560bp) protein (520aa) |
lytic transglycosylase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368D11F
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:GAD23986.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
lytic transglycosylase subunit
|
|
SCNpilot_BF_INOC_scaffold_425_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10501..11229)
----------------- DNA (729bp) protein (243aa) |
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1603291 species="Bacteria; Pro
Hydroxyacylglutathione hydrolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVT5_ALIDB
hydroxyacylglutathione hydrolase
|
|
SCNpilot_BF_INOC_scaffold_425_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11276..12079
----------------- DNA (804bp) protein (268aa) |
UPI0003D3F1EC related cluster n=1 Tax=unknown RepID=UPI0003D3F1EC
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAD23988.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
type 11 methyltransferase
|
|
SCNpilot_BF_INOC_scaffold_425_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12097..12540
----------------- DNA (444bp) protein (148aa) |
Ribonuclease H {ECO:0000255|HAMAP-Rule:MF_00042}; Short=RNase H {ECO:0000255|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00042};; TaxID=232721 species="Bacteria; Proteobacteria; Beta
Ribonuclease H n=1 Tax=Acidovorax sp. (strain JS42) RepID=RNH_ACISJ
rnhA; ribonuclease H
|
|
SCNpilot_BF_INOC_scaffold_425_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12635..14893)
----------------- DNA (2259bp) protein (753aa) |
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein id=12553311 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor
|
|
SCNpilot_BF_INOC_scaffold_425_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15142..16863
----------------- DNA (1722bp) protein (574aa) |
nitrite reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037120F7
Hydroxylamine reductase {ECO:0000313|EMBL:GAD22027.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
nirS; nitrite reductase (NO-forming) NirS
|
|
SCNpilot_BF_INOC_scaffold_425_17
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17001..17753)
----------------- DNA (753bp) protein (251aa) |
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003778C5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47278.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
|
|
SCNpilot_BF_INOC_scaffold_425_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17792..18622)
----------------- DNA (831bp) protein (277aa) |
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CF236
iron permease FTR1 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
iron permease FTR1
|
|
SCNpilot_BF_INOC_scaffold_425_19
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18635..18961)
----------------- DNA (327bp) protein (109aa) |
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036FAE71
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26761.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
|
|
SCNpilot_BF_INOC_scaffold_425_20
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19306..19680)
----------------- DNA (375bp) protein (125aa) |
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTN0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20986.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
|
|
SCNpilot_BF_INOC_scaffold_425_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19710..20339)
----------------- DNA (630bp) protein (210aa) |
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01218}; EC=2.4.2.9 {ECO:0000255|HAMAP-Rule:MF_01218};; UMP pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000255|HAMAP-R
Uracil phosphoribosyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=UPP_ACISJ
|
|
SCNpilot_BF_INOC_scaffold_425_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20357..21322)
----------------- DNA (966bp) protein (322aa) |
Threo-3-hydroxyaspartate ammonia-lyase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXL8_9BURK
Threo-3-hydroxyaspartate ammonia-lyase {ECO:0000313|EMBL:EHL22828.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
pyridoxal-5'-phosphate-dependent enzyme subunit beta
|
|
SCNpilot_BF_INOC_scaffold_425_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21410..22927)
----------------- DNA (1518bp) protein (506aa) |
Putative hydrolase {ECO:0000313|EMBL:EIK92471.1}; EC=3.6.1.15 {ECO:0000313|EMBL:EIK92471.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydro
Putative hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTD1_9BURK
hypothetical protein
|
|
SCNpilot_BF_INOC_scaffold_425_24
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22991..23710
----------------- DNA (720bp) protein (240aa) |
Probable transcriptional regulatory protein CtCNB1_2899 n=3 Tax=Comamonas testosteroni RepID=D0J0H4_COMT2
hypothetical protein
Probable transcriptional regulatory protein P245_03805 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;"
|
|
SCNpilot_BF_INOC_scaffold_425_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23793..25067
----------------- DNA (1275bp) protein (425aa) |
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0F4_ALIDB
|
|
SCNpilot_BF_INOC_scaffold_425_26
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25064..26002
----------------- DNA (939bp) protein (313aa) |
coproporphyrinogen oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Acidovorax sp. CF316 RepID=J1EBZ7_9BURK
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprop
|
|
SCNpilot_BF_INOC_scaffold_425_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26104..26784
----------------- DNA (681bp) protein (227aa) |
Ribosomal silencing factor RsfS n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0F6_ALIDB
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
|
|
SCNpilot_BF_INOC_scaffold_425_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26797..27264
----------------- DNA (468bp) protein (156aa) |
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
50S rRNA methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000373FA20
hypothetical protein
|
|
SCNpilot_BF_INOC_scaffold_425_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27326..28153)
----------------- DNA (828bp) protein (276aa) |
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV2_9BURK
ABC transporter permease
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
SCNpilot_BF_INOC_scaffold_425_30
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28160..28972)
----------------- DNA (813bp) protein (271aa) |
NitT family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV3_9BURK
Tax=BJP_08E140C01_Burkholderiales_65_30
|