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SCNpilot_BF_INOC_scaffold_643

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_643_31
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28567..30315
DNA (1749bp) protein (583aa)
ribonuclease E (EC:3.1.4.-)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=232721 species="Bacteria; Proteobacteria; Bet
Ribonuclease E n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAY7_ACISJ
SCNpilot_BF_INOC_scaffold_643_32
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30474..31253
DNA (780bp) protein (260aa)
UPF0246 protein Dtpsy_2644 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDS0_ACIET
hypothetical protein
UPF0246 protein Dtpsy_2644 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebre
SCNpilot_BF_INOC_scaffold_643_33
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31250..32104
DNA (855bp) protein (285aa)
2OG-Fe(II) oxygenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAZ0_ACISJ
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ABM43415.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS
SCNpilot_BF_INOC_scaffold_643_34
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32152..32997
DNA (846bp) protein (282aa)
queF; 7-cyano-7-deazaguanine reductase; K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
queF; 7-cyano-7-deazaguanine reductase; K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] id=12549865 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
queF; 7-cyano-7-deazaguanine reductase
SCNpilot_BF_INOC_scaffold_643_35
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33174..34502
DNA (1329bp) protein (443aa)
Cl-channel voltage-gated family protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QDL1_ACIAP
Cl-channel voltage-gated family protein
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:ADX47571.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
SCNpilot_BF_INOC_scaffold_643_36
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34724..35926)
DNA (1203bp) protein (401aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=596153 species="Bacteria; Proteobacteria; Bet
DNA polymerase IV n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNL0_ACIAC
SCNpilot_BF_INOC_scaffold_643_37
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36076..37248)
DNA (1173bp) protein (391aa)
L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3)
L-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEB83644.1}; EC=1.1.2.3 {ECO:0000313|EMBL:AEB83644.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
L-lactate dehydrogenase (Cytochrome) n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA8_ALIDB
SCNpilot_BF_INOC_scaffold_643_38
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37324..38307)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037805B9
NADPH:quinone reductase {ECO:0000313|EMBL:GAD20605.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
yhdH; biotin carboxylase
SCNpilot_BF_INOC_scaffold_643_39
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38375..39532)
DNA (1158bp) protein (386aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR38_ALIDB
SCNpilot_BF_INOC_scaffold_643_40
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39766..41226)
DNA (1461bp) protein (487aa)
peptidase C69 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F3A8E
Peptidase u62 modulator of DNA gyrase {ECO:0000313|EMBL:GAD23807.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
peptidase u62 modulator of DNA gyrase
SCNpilot_BF_INOC_scaffold_643_41
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41248..42495)
DNA (1248bp) protein (416aa)
Rod shape-determining protein RodA n=2 Tax=Alicycliphilus denitrificans RepID=E8TR40_ALIDB
rod shape-determining protein roda
Rod shape-determining protein RodA {ECO:0000313|EMBL:ADV01391.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
SCNpilot_BF_INOC_scaffold_643_42
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42526..43110
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFP1_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34392.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
SCNpilot_BF_INOC_scaffold_643_43
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43168..43929
DNA (762bp) protein (254aa)
Metallophosphoesterase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9E0_ACIDE
Metallophosphoesterase {ECO:0000313|EMBL:EER58906.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
calcineurin-like phosphoesterase
SCNpilot_BF_INOC_scaffold_643_44
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43971..46040
DNA (2070bp) protein (690aa)
Ribonuclease II n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR46_ALIDB
ribonuclease ii
Ribonuclease II {ECO:0000313|EMBL:ADV01397.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrifica
SCNpilot_BF_INOC_scaffold_643_45
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46043..46906
DNA (864bp) protein (288aa)
TonB family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR47_ALIDB
TonB family protein
TonB family protein {ECO:0000313|EMBL:AEB86141.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
SCNpilot_BF_INOC_scaffold_643_46
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46903..47748
DNA (846bp) protein (282aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=232721 species="Bacteria; Prote
Shikimate dehydrogenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=AROE_ACISJ
SCNpilot_BF_INOC_scaffold_643_47
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47745..48479
DNA (735bp) protein (245aa)
monofunctional biosynthetic peptidoglycan transglycosylase id=12550608 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
monofunctional biosynthetic peptidoglycan transglycosylase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
monofunctional biosynthetic peptidoglycan transglycosylase
SCNpilot_BF_INOC_scaffold_643_48
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48483..49046
DNA (564bp) protein (188aa)
crossover junction endodeoxyribonuclease ruvc (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Alicycliphilus denitrificans RepID=E8TR53_ALIDB
SCNpilot_BF_INOC_scaffold_643_49
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49040..49729)
DNA (690bp) protein (230aa)
DSBA oxidoreductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3S4_ACISJ
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ABM40899.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS4
SCNpilot_BF_INOC_scaffold_643_50
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49850..50668
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNZ0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EYC51430.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
hypothetical protein
SCNpilot_BF_INOC_scaffold_643_51
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50685..52451
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034C68A7
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Tax=GWA2_Rhodocyclales_65_20_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_BF_INOC_scaffold_643_52
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52625..54022
DNA (1398bp) protein (466aa)
HipA-like protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z0S9_9GAMM
HipA-like protein {ECO:0000313|EMBL:EIC21311.1}; Flags: Precursor;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorho
HipA domain-containing protein
SCNpilot_BF_INOC_scaffold_643_53
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54130..54381)
DNA (252bp) protein (84aa)
Integrase/recombinase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0W5_9BURK
IntI1 protein {ECO:0000313|EMBL:GAO21876.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
int; phage-related integrase
SCNpilot_BF_INOC_scaffold_643_54
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54395..55138)
DNA (744bp) protein (248aa)
Integrase/recombinase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0W5_9BURK
Integrase/recombinase {ECO:0000313|EMBL:EHL21620.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
integrase/recombinase
SCNpilot_BF_INOC_scaffold_643_55
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55393..56397
DNA (1005bp) protein (335aa)
UPI0003CFE7DF related cluster n=1 Tax=unknown RepID=UPI0003CFE7DF
Uncharacterized protein {ECO:0000313|EMBL:KJE40721.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
SCNpilot_BF_INOC_scaffold_643_56
unknown

Not on your lists

comp(56710..57030)
DNA (321bp) protein (107aa)

This feature has no annotations

Displaying items 31-56 of 56 in total

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