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SCNpilot_BF_INOC_scaffold_643

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_643_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190..1740
DNA (1551bp) protein (517aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TW73_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO21182.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_BF_INOC_scaffold_643_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1841..2536
DNA (696bp) protein (232aa)
OmpW family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TW72_ALIDB
OmpW family protein
OmpW family protein {ECO:0000313|EMBL:AEB86788.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_BF_INOC_scaffold_643_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2600..3679)
DNA (1080bp) protein (360aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000376414D
6-phosphofructokinase {ECO:0000313|EMBL:GAD22391.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_BF_INOC_scaffold_643_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3676..4755)
DNA (1080bp) protein (360aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:00
Glycoside hydrolase family 3 domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYJ2_ALIDB
glycoside hydrolase family protein
SCNpilot_BF_INOC_scaffold_643_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4819..5211)
DNA (393bp) protein (131aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
4''''-phosphopantetheinyl transferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E92BA
phosphopantetheine-protein transferase
SCNpilot_BF_INOC_scaffold_643_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5243..6031)
DNA (789bp) protein (263aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2J9_ACIDE
pyridoxine 5'-phosphate synthase
SCNpilot_BF_INOC_scaffold_643_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6028..6792)
DNA (765bp) protein (255aa)
DNA repair protein RecO n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003775491
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1268622 species="Bacteria; Proteobacteria; Be
DNA repair protein RecO
SCNpilot_BF_INOC_scaffold_643_8
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6887..7822)
DNA (936bp) protein (312aa)
GTPase Era n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TLF1_ACIAC
GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="
SCNpilot_BF_INOC_scaffold_643_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7819..8502)
DNA (684bp) protein (228aa)
rnc; ribonuclease iii (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:00
Ribonuclease 3 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAW5_ACISJ
SCNpilot_BF_INOC_scaffold_643_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8506..8871)
DNA (366bp) protein (122aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000361D9CE
Putative transmembrane protein {ECO:0000313|EMBL:GAD22398.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
transmembrane protein
SCNpilot_BF_INOC_scaffold_643_11
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8886..9854)
DNA (969bp) protein (323aa)
signal peptidase i (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Signal peptidase I n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDP8_ACIET
SCNpilot_BF_INOC_scaffold_643_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9860..11668)
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
elongation factor 4 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035CF4EB
GTP-binding protein LepA
SCNpilot_BF_INOC_scaffold_643_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11844..13325)
DNA (1482bp) protein (494aa)
protease Do (EC:3.4.21.108)
peptidase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036495F1
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:GAD22401.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_BF_INOC_scaffold_643_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13416..14003)
DNA (588bp) protein (196aa)
UPI0003D3BFA8 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3BFA8
Uncharacterized protein {ECO:0000313|EMBL:GAD22403.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
anti sigma-e protein RseA
SCNpilot_BF_INOC_scaffold_643_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14048..14677)
DNA (630bp) protein (210aa)
UPI0003D3DBCF related cluster n=1 Tax=unknown RepID=UPI0003D3DBCF
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_BF_INOC_scaffold_643_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15193..16437)
DNA (1245bp) protein (415aa)
3-oxoacyl-ACP synthase II (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
3-oxoacyl-ACP synthase n=1 Tax=Acidovorax avenae RepID=UPI0002EB340A
SCNpilot_BF_INOC_scaffold_643_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16510..16749)
DNA (240bp) protein (80aa)
Acyl carrier protein n=18 Tax=Comamonadaceae RepID=ACP_ACIAC
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria
SCNpilot_BF_INOC_scaffold_643_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16848..17588)
DNA (741bp) protein (247aa)
3-ketoacyl-ACP reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000375E4EF
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:GAD22408.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
3-oxoacyl-ACP reductase
SCNpilot_BF_INOC_scaffold_643_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17585..18538)
DNA (954bp) protein (318aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TYK9_ALIDB
malonyl CoA-acyl carrier protein transacylase
SCNpilot_BF_INOC_scaffold_643_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18592..19569)
DNA (978bp) protein (326aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=cellular organisms RepID=FABH_DELAS
SCNpilot_BF_INOC_scaffold_643_21
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19599..20624)
DNA (1026bp) protein (342aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]
Phosphate acyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=PLSX_ACIET
glycerol-3-phosphate acyltransferase plsx
SCNpilot_BF_INOC_scaffold_643_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20820..21011)
DNA (192bp) protein (64aa)
50S ribosomal protein L32 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKU4_9BURK
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
rpmF; 50S ribosomal protein L32
SCNpilot_BF_INOC_scaffold_643_23
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21127..21678)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI0003812BE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX45116.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (str
SCNpilot_BF_INOC_scaffold_643_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21704..22303
DNA (600bp) protein (200aa)
Maf-like protein C380_07170 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQ51_9BURK
maf protein
Maf-like protein C380_07170 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
SCNpilot_BF_INOC_scaffold_643_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22300..23070
DNA (771bp) protein (257aa)
uroporphyrin-III methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D332B
Predicted methyltransferases {ECO:0000313|EMBL:GAD22415.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
uroporphyrin-III C/tetrapyrrole methyltransferase
SCNpilot_BF_INOC_scaffold_643_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23072..23854
DNA (783bp) protein (261aa)
enoyl-CoA hydratase n=1 Tax=Curvibacter lanceolatus RepID=UPI000378CAF8
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EJL70918.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vario
enoyL-CoA hydratase/isomerase
SCNpilot_BF_INOC_scaffold_643_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23876..24919)
DNA (1044bp) protein (348aa)
Peptidase S49 n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ93_ALIDB
peptidase S49
Peptidase S49 {ECO:0000313|EMBL:GAO24497.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_BF_INOC_scaffold_643_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24924..25310)
DNA (387bp) protein (129aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ94_ALIDB
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:ADV00915.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_BF_INOC_scaffold_643_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25307..25975)
DNA (669bp) protein (223aa)
HAD family hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003742DD6
Predicted phosphatases {ECO:0000313|EMBL:GAD22419.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;
had-superfamily hydrolase
SCNpilot_BF_INOC_scaffold_643_30
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25972..26958)
DNA (987bp) protein (329aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Pseudouridine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDR8_ACIET
RluA family pseudouridine synthase
Displaying items 1-30 of 56 in total

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