ggKbase home page

SCNpilot_BF_INOC_scaffold_643_15

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(14048..14677)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D3DBCF related cluster n=1 Tax=unknown RepID=UPI0003D3DBCF similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 200.0
  • Bit_score: 339
  • Evalue 2.40e-90
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 200.0
  • Bit_score: 339
  • Evalue 3.40e-90
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 211.0
  • Bit_score: 337
  • Evalue 3.40e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGAATCCGCCGGATCCCACCCCGTCCGTCAACAGTGACCTGCAACTGGTCGAGCGTACGGTGGCGGGCGATCAGCGCGCCTACGAATTGCTGGTGATCAAGTACCAGCGGCGCATCGAACGCCTGATCGGCCGCATGGTGCGTGACGTCGATCTCGTCCAGGATATCGCGCAGGAAACGTTCTTGCGCGCCTATCGGGCCTTGCACCAGTTTCGCGGGGATGCGCAGTTCTATACCTGGCTGTACCGGATCGCGGTCAATACGGCGAAAAAGACGCTGATGGACCTCAAGCGAGACCCGTTGATCACCGAAAGCGCACTGCGCAGCGCGGTTGACGACGACGATGAAACTTCCGTGATGACGCGCGAACTAACCACCGACGACACGCCCGAAACGCTTTTGGCGGCACAGGAAGTGGCGCAGGCGGTCAATACCGCCTTGCAGGCTTTGCCGCAGGAATTGCGCCAGGCTGTCACGCTGCGCGAGATCGAGGGCCTGAGCTACGAGGAAATTGCCCAGGCCATGGGGTGTCCTATAGGCACCGTGCGTTCCCGGATCTTTCGCGCGCGCGAGGCGATTTCGGCGAAGGTCAAGCCTCTGCTGGAAAGTCGGACGGGCAAGCGCTGGTGA
PROTEIN sequence
Length: 210
MNPPDPTPSVNSDLQLVERTVAGDQRAYELLVIKYQRRIERLIGRMVRDVDLVQDIAQETFLRAYRALHQFRGDAQFYTWLYRIAVNTAKKTLMDLKRDPLITESALRSAVDDDDETSVMTRELTTDDTPETLLAAQEVAQAVNTALQALPQELRQAVTLREIEGLSYEEIAQAMGCPIGTVRSRIFRAREAISAKVKPLLESRTGKRW*