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SCNpilot_BF_INOC_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 267 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_91_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165..827)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DDA729
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46335.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_91_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1056..1829
DNA (774bp) protein (258aa)
aminotransferase class I and II n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D34C4
Uncharacterized protein {ECO:0000313|EMBL:GAD22235.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_BF_INOC_scaffold_91_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1816..2226
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003764781
Uncharacterized protein {ECO:0000313|EMBL:GAD22234.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_BF_INOC_scaffold_91_4
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2223..3725
DNA (1503bp) protein (501aa)
cobyric acid synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003723DBE
cobyric acid synthase CobQ Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
cobyric acid synthase cobq
SCNpilot_BF_INOC_scaffold_91_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3747..4784
DNA (1038bp) protein (346aa)
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] id=5081263 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] Tax=GWE1_Burkholderiale
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
SCNpilot_BF_INOC_scaffold_91_6
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4797..6992)
DNA (2196bp) protein (732aa)
TonB-dependent heme/hemoglobin receptor family protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RVL3_9BURK
TonB-dependent heme/hemoglobin receptor family protein {ECO:0000313|EMBL:EFV95817.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;
hemR; hemin receptor , TonB-dependent outer membrane uptake protein
SCNpilot_BF_INOC_scaffold_91_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7105..7911
DNA (807bp) protein (269aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
Cobalamin synthase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKN9_VARPS
cobalamin-5-phosphate synthase CobS
SCNpilot_BF_INOC_scaffold_91_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7908..8465
DNA (558bp) protein (186aa)
Putative phosphoglycerate mutase n=1 Tax=Variovorax paradoxus B4 RepID=T1XC28_VARPD
putative phosphoglycerate mutase
Putative phosphoglycerate mutase {ECO:0000313|EMBL:AGU50078.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax p
SCNpilot_BF_INOC_scaffold_91_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8536..9408
DNA (873bp) protein (291aa)
fumarylacetoacetate hydrolase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036B05AB
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:GAD22129.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
fumarylacetoacetate (faa) hydrolase
SCNpilot_BF_INOC_scaffold_91_10
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9500..10549
DNA (1050bp) protein (350aa)
Mechanosensitive ion channel family protein n=1 Tax=Ralstonia sp. PBA RepID=I9W642_9RALS
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EIZ03914.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="R
putative MscS mechanosensitive ion channel
SCNpilot_BF_INOC_scaffold_91_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10559..11524
DNA (966bp) protein (322aa)
alpha/beta hydrolase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00035C78F1
Esterase/lipase {ECO:0000313|EMBL:GAD22128.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
alpha/beta hydrolase domain-containing protein
SCNpilot_BF_INOC_scaffold_91_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11529..12410
DNA (882bp) protein (294aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BBFC6
Predicted thioesterase {ECO:0000313|EMBL:GAD22127.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;
thioesterase superfamily protein
SCNpilot_BF_INOC_scaffold_91_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12565..13908)
DNA (1344bp) protein (448aa)
UPI0003AABEE1 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003AABEE1
Predicted hydrolase {ECO:0000313|EMBL:GAD20536.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_91_14
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13986..15356
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037518FA
Uncharacterized protein {ECO:0000313|EMBL:EZQ13298.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
SCNpilot_BF_INOC_scaffold_91_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15427..16416
DNA (990bp) protein (330aa)
aminodeoxychorismate lyase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037EA87F
Predicted periplasmic solute-binding protein {ECO:0000313|EMBL:GAD22125.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="
aminodeoxychorismate lyase
SCNpilot_BF_INOC_scaffold_91_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16427..17089
DNA (663bp) protein (221aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000255|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000255|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000255|HAMAP-Rule:MF_00165}; TaxID=232721 species="Bacteria; Proteobacteria; Beta
Thymidylate kinase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MA71_ACIET
SCNpilot_BF_INOC_scaffold_91_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17082..18098
DNA (1017bp) protein (339aa)
DNA-directed DNA polymerase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F82F8
ATPase involved in DNA replication {ECO:0000313|EMBL:GAD22123.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
DNA-directed DNA polymerase
SCNpilot_BF_INOC_scaffold_91_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18173..18532
DNA (360bp) protein (120aa)
Type IV pilus assembly pilz n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Q5_9BURK
type IV pilus assembly pilz
Type IV pilus assembly pilz {ECO:0000313|EMBL:AFU45840.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS
SCNpilot_BF_INOC_scaffold_91_19
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18566..19375
DNA (810bp) protein (270aa)
Hydrolase, TatD family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6N5_ACISJ
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ABM41910.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acid
SCNpilot_BF_INOC_scaffold_91_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19372..20055
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUX3_ALIDB
ankyrin
Uncharacterized protein {ECO:0000313|EMBL:ADU99382.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_BF_INOC_scaffold_91_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20158..21930)
DNA (1773bp) protein (591aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria;
UPI0003D3B96D related cluster n=1 Tax=unknown RepID=UPI0003D3B96D
lipid a ABC exporter, fused ATPase and inner membrane subunits msba
SCNpilot_BF_INOC_scaffold_91_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22048..23343
DNA (1296bp) protein (432aa)
Protein TolB n=2 Tax=Alicycliphilus denitrificans RepID=E8TUY3_ALIDB
tol-pal system beta propeller repeat protein TolB
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_BF_INOC_scaffold_91_23
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23374..23895
DNA (522bp) protein (174aa)
peptidoglycan-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000378E11F
OmpA domain-containing protein
OmpA domain protein {ECO:0000313|EMBL:ABM33962.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
SCNpilot_BF_INOC_scaffold_91_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23909..24673
DNA (765bp) protein (255aa)
tol-pal system protein YbgF n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037DC49A
Uncharacterized protein {ECO:0000313|EMBL:GAD22116.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
tol-pal system protein YbgF
SCNpilot_BF_INOC_scaffold_91_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24670..25464
DNA (795bp) protein (265aa)
UBA/THIF-type NAD/FAD-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY49_9BURK
UBA/THIF-type NAD/FAD-binding protein
UBA/THIF-type NAD/FAD-binding protein {ECO:0000313|EMBL:AFU45847.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
SCNpilot_BF_INOC_scaffold_91_26
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25935..26567)
DNA (633bp) protein (211aa)
Phospholipase/Carboxylesterase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y184_LEPCP
phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ACB33061.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain AT
SCNpilot_BF_INOC_scaffold_91_27
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26582..27385)
DNA (804bp) protein (268aa)
LigB family dioxygenase {ECO:0000313|EMBL:EXI89847.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
extradiol ring-cleavage dioxygenase class III protein subunit B id=5082900 bin=GWF1_Burkholderiales_GWF1_66_17 species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
extradiol ring-cleavage dioxygenase class III protein subunit B
SCNpilot_BF_INOC_scaffold_91_28
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27385..27828)
DNA (444bp) protein (148aa)
DoxD-like family protein n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PEZ4_MARAH
DoxD-like family protein
DoxD-like family protein {ECO:0000313|EMBL:ADP96699.1}; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter adh
SCNpilot_BF_INOC_scaffold_91_29
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27873..28505)
DNA (633bp) protein (211aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y183_LEPCP
coenzyme F420-dependent NADP oxidoreductase
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:ACB33060.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodn
SCNpilot_BF_INOC_scaffold_91_30
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28757..29002
DNA (246bp) protein (82aa)
ABC-type transport system leu/ile/val-binding signal peptide protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SY92_JANMA
livK4; ABC transporter leu/Ile/val-binding signal peptide protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
livK4; ABC transporter leu/Ile/val-binding signal peptide protein
Displaying items 1-30 of 267 in total

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