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SCNpilot_BF_INOC_scaffold_988

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_988_1
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..552)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK7_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61942.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
SCNpilot_BF_INOC_scaffold_988_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(556..1116)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK6_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61941.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
SCNpilot_BF_INOC_scaffold_988_3
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1130..2809)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK5_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61940.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
SCNpilot_BF_INOC_scaffold_988_4
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2802..3059)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK4_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61939.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
SCNpilot_BF_INOC_scaffold_988_5
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3043..3909)
DNA (867bp) protein (289aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK3_RALP1
cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACS61938.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia
SCNpilot_BF_INOC_scaffold_988_6
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3950..4168)
DNA (219bp) protein (73aa)
Phage transcriptional regulator, AlpA n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK2_RALP1
phage transcriptional regulator AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ACS61937.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralston
SCNpilot_BF_INOC_scaffold_988_7
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4310..5068)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4JKB3_9BURK
receptor protein-tyrosine kinase
Receptor protein-tyrosine kinase {ECO:0000313|EMBL:AJF00749.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea api
SCNpilot_BF_INOC_scaffold_988_8
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5607..6515)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=C6BDK0_RALP1
D-alanyl-D-alanine endopeptidase
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:AJE97696.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea api
SCNpilot_BF_INOC_scaffold_988_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6914..7327
DNA (414bp) protein (138aa)
Transcriptional regulator, ArsR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFI8_NITHX
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABE65009.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
SCNpilot_BF_INOC_scaffold_988_10
Acinetobacter nectaris, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7361..8392
DNA (1032bp) protein (344aa)
Phosphate ABC transporter, phosphate-binding protein PstS n=1 Tax=Acinetobacter nectaris CIP 110549 RepID=V2TLK9_9GAMM
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1392540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetoba
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS
SCNpilot_BF_INOC_scaffold_988_11
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8441..9421
DNA (981bp) protein (327aa)
ABC-type phosphate transport system, periplasmic component n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2F9_HERAR
ABC-type phosphate transport system periplasmic protein
ABC-type phosphate transport system, periplasmic component {ECO:0000313|EMBL:CAL60696.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Hermini
SCNpilot_BF_INOC_scaffold_988_12
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9471..10112
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G0_HERAR
signal peptide
Uncharacterized protein {ECO:0000313|EMBL:CAL60697.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas ars
SCNpilot_BF_INOC_scaffold_988_13
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10201..12462
DNA (2262bp) protein (754aa)
Putative ABC-type phosphate transport system, permease component n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G1_HERAR
ABC transporter permease; K02037 phosphate transport system permease protein Tax=CG_Rhodof_03
ABC transporter permease
SCNpilot_BF_INOC_scaffold_988_14
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12477..14132
DNA (1656bp) protein (552aa)
Putative ABC-type phosphate transport system, auxiliary and permease component n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G2_HERAR
membrane protein component of ABC phosphate transporter pstA-like; K02038 phosphate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
membrane protein component of ABC phosphate transporter pstA-like
SCNpilot_BF_INOC_scaffold_988_15
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14173..15018
DNA (846bp) protein (282aa)
pstB2; phosphate import ATP-binding protein (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=CG_Rhodof_03
pstB2; phosphate import ATP-binding protein (EC:3.6.3.27)
Phosphate import ATP-binding protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G3_HERAR
SCNpilot_BF_INOC_scaffold_988_16
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15047..15790
DNA (744bp) protein (248aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G4_HERAR
transcriptional repressor for high-affinity phosphate uptake; K02039 phosphate transport system protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
transcriptional repressor for high-affinity phosphate uptake
SCNpilot_BF_INOC_scaffold_988_17
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15940..16899
DNA (960bp) protein (320aa)
Phosphonate ABC transporter periplasmic phosphonate-binding protein n=2 Tax=Alcaligenes faecalis RepID=J0JE05_ALCFA
Oxyanion binding protein {ECO:0000313|EMBL:AAQ19836.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
phosphonate-binding periplasmic protein
SCNpilot_BF_INOC_scaffold_988_18
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16926..17753
DNA (828bp) protein (276aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
Phosphonates import ATP-binding protein PhnC n=2 Tax=Alcaligenes faecalis RepID=PHNC_ALCFA
phosphonate ABC transporter ATPase
SCNpilot_BF_INOC_scaffold_988_19
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17750..18553
DNA (804bp) protein (268aa)
Phosphonate ABC transporter, ATPase subunit n=2 Tax=Alcaligenes faecalis RepID=J0AZ85_ALCFA
Phosphonate ABC transporter, ATPase subunit {ECO:0000313|EMBL:EJC61957.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="
phosphonate ABC transporter ATPase
SCNpilot_BF_INOC_scaffold_988_20
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18550..19353
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI0003722B3E
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KGF30462.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella u
phosphonate ABC transporter inner membrane subunit
SCNpilot_BF_INOC_scaffold_988_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19637..20545
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=19 Tax=Proteobacteria RepID=C6BDI3_RALP1
LysR family transcriptional regulator {ECO:0000313|EMBL:CDH79117.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
D-alanyl-D-alanine endopeptidase
SCNpilot_BF_INOC_scaffold_988_22
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20629..21582)
DNA (954bp) protein (318aa)
DNA binding domain, excisionase family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMD3_XANP2
DNA binding domain-containing protein
DNA binding domain, excisionase family {ECO:0000313|EMBL:ABS69176.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xantho
SCNpilot_BF_INOC_scaffold_988_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21770..22564
DNA (795bp) protein (265aa)
modA-1; molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein id=5079808 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
modA-1; molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein Tax=GWE1_Burkholderiales_65_30_curated
modA-1; molybdenum ABC transporter periplasmic molybdate-binding protein
SCNpilot_BF_INOC_scaffold_988_24
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22587..23357
DNA (771bp) protein (257aa)
molybdate ABC transporter substrate-binding protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035D3575
modA-2; molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
modA-2; molybdenum ABC transporter periplasmic molybdate-binding protein
SCNpilot_BF_INOC_scaffold_988_25
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23373..24191
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036A9BCB
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE23256.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
SCNpilot_BF_INOC_scaffold_988_26
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24207..24884
DNA (678bp) protein (226aa)
molybdenum ABC transporter permease n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003718592
modB; molybdenum ABC transporter permease
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_988_27
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24889..25953
DNA (1065bp) protein (355aa)
Molybdenum import ATP-binding protein ModC {ECO:0000255|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000255|HAMAP-Rule:MF_01705};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methy
molybdenum ABC transporter ATP-binding protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00038139F9
modC; molybdenum ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_988_28
unknown

Not on your lists

26040..26204
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 28 items

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