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SCNpilot_BF_INOC_scaffold_335_57

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 55997..58219

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRJ1_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 773.0
  • Bit_score: 1204
  • Evalue 0.0
RNA polymerase sigma factor rpod similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 773.0
  • Bit_score: 1204
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 773.0
  • Bit_score: 1204
  • Evalue 0.0

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2223
ATGCCAGCTCGAAAGTCCGCCGCGCCCGCAACCGATGGCGTCAGCGCCAAAAAGTCCAAGGCCAGTGCCGAAGCAGAAGAAAAACTGACCCAAAAACCTGCCAAGAAGGCTGAAACGCAGGCGGCGAAGAAGCCTGCCGCCGCCAAGAAACCTGCTTCCGACAGCCAGAACAAGCCCGCCAAGGCCACCAAGGCCAAGGTGGAGCCCGCGGCCAGGGGCAAGGGCAAGGCAAAAGCCAAGGGCAAGACGAAGGACGACTTTCAGGACGACACCGACCTGTCGGACATCGAGGCCGACCTGGAAGGCGAACCCGAGCAGGAGTCTCCCGCGACTGACGTTGCCGCTCCGGTGGAGAAGGTCAAGCCCCTGCGCATGAAGATCAGCAAGGCCAAGGAACGGGCCTTGATGAAGGAGTTCGGCCTGGACGAAACCGTCCTCTCCGAAGAGGACATGGCCAAGCGCCGCGCGCAGCTCAAGAAGCTGATCACGCTGGGCAAGACGCGCGGCTACCTCACGCAGGGCGAAATCTCCGACCACCTGCCCGACAAGCTCGTCGACGCCGAGACCATGGAGGCCGTGGCCGCGCTGCTCAGCGACATGGGCGTGGCCATCTACGAGCAGACGCCCGATGCCGAAACGCTGTTCCAGAACAACGTCACCCCCACGGCCACCACCGTGGAAGAAGCCGAGGAAGAAGCCGAAGCCGCCCTGTCCACCGTGGACAGCGAGTTCGGCCGCACCACCGACCCGGTGCGCATGTACATGCGCGAGATGGGCACGGTGGAGTTGCTCACGCGCGAGGGCGAGATCGAGATCGCCAAGCGCATCGAGGGCGGCCTGATGGACATGATGGAGGCCATCAGCGCCTCGCCCGCCACCATCGCCGAGATCCTCAACATGGGCGAGGAAATCCGCGAGGGCAAGGTCGTCATCAACACCGTGGTCGACGGCTTCGCTGACCCCGAGGAAGCCGACGACTACGTGGCCGAGGAAGACTTCGACGAATACGACGAAGAGGACGACGACGACGGCAAGGGCGGCTCCAAGGCCATGACGCGCCTGCTGGAAAAGCTCAAGAGCGATGCGCTCGAGCGCTTCGACGAACTGCGCGCGCTGTTCGAGAAGATGCACAAGATCTACGACCGCGAAGGCTACGGCACGCCCACCTACATGAAGGTGCAGCACGAGATCTCGGCCAAGCTGATGTCGATCCGCTTCACCGCCAAGACCATCGAGAAACTGTGCGACATGGTGCGCGACCAGGTGGACGACGTGCGCAAGAGGGAGCGCCAGCTGCGCCACATCATCGTGGACAAGTGCGGCATGCCGCAGGAGGCCGCCGCCGGCAAGCCGTGGAGCGCCATCATGGGGCGCAACATCCCACCGATTCAGGAACTGCAGCAGAACCTCATCGACCTGCAGACCCGCGTGGTGGTGCCGCTGGCGGAGCTCAAGGCCATCCACAAGCGCATGAACGACGGCGAACGCGCCAGCCGCCACGCCAAGAAGGAGATGATCGAGGCCAACCTGCGCCTGGTGATCTCCATCGCCAAGAAGTACACCAACCGCGGCCTGCAGTTCCTCGATCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCCGTGGACAAGTTCGAATACCGCCGCGGCTACAAATTCTCGACCTACGCCACCTGGTGGATCCGCCAGGCGATCACGCGCTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGATGAACCGCATCTCGCGCCAGCACCTGCAGGAGTTCGGCTTCGAGCCCGACGCTAGCCTGCTCGCGGAGAAGATGGAGATCCCCGAGGACAAGATCCGCAAGATCATGAAGATCGCCAAGGAGCCGATCTCGATGGAAACCCCCATCGGCGACGACGACGACAGCCACCTGGGCGACTTCATCGAGGACAGCAACAACACCGCGCCCGTGGATGCCGCCATGCAGGCCGGCCTGCGCGACGTGGTCAAGGACATCCTCGACGGCCTCACGCCGCGCGAAGCCAAGGTGCTGCGCATGCGCTTCGGCATCGAAATGTCCACCGACCACACGCTGGAGGAAGTGGGCAAGCAGTTCGACGTGACGCGCGAGCGCATCCGCCAGATCGAAGCCAAGGCGCTGCGCAAGCTCAAGCACCCAAGCCGCAGCGACAAGCTGCGCAGCTTCATCGATTCGCTGTAA
PROTEIN sequence
Length: 741
MPARKSAAPATDGVSAKKSKASAEAEEKLTQKPAKKAETQAAKKPAAAKKPASDSQNKPAKATKAKVEPAARGKGKAKAKGKTKDDFQDDTDLSDIEADLEGEPEQESPATDVAAPVEKVKPLRMKISKAKERALMKEFGLDETVLSEEDMAKRRAQLKKLITLGKTRGYLTQGEISDHLPDKLVDAETMEAVAALLSDMGVAIYEQTPDAETLFQNNVTPTATTVEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLMDMMEAISASPATIAEILNMGEEIREGKVVINTVVDGFADPEEADDYVAEEDFDEYDEEDDDDGKGGSKAMTRLLEKLKSDALERFDELRALFEKMHKIYDREGYGTPTYMKVQHEISAKLMSIRFTAKTIEKLCDMVRDQVDDVRKRERQLRHIIVDKCGMPQEAAAGKPWSAIMGRNIPPIQELQQNLIDLQTRVVVPLAELKAIHKRMNDGERASRHAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQEFGFEPDASLLAEKMEIPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDSNNTAPVDAAMQAGLRDVVKDILDGLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKALRKLKHPSRSDKLRSFIDSL*