ggKbase home page

SCNpilot_BF_INOC_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_358_1
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(192..539)
DNA (348bp) protein (116aa)
Transcriptional regulator, HxlR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYD7_9FLAO
HxlR family transcriptional regulator {ECO:0000313|EMBL:KGO11065.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Eliz
transcriptional regulator, HxlR family
SCNpilot_BF_INOC_scaffold_358_2
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

630..1154
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYD8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO11066.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mi
Dihydrofolate reductase
SCNpilot_BF_INOC_scaffold_358_3
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1301..2140
DNA (840bp) protein (280aa)
RteC protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYD9_9FLAO
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KGO11067.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="
RteC protein
SCNpilot_BF_INOC_scaffold_358_4
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2404..3954
DNA (1551bp) protein (517aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EFK36981.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EFK36981.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteri
hsdM; type I restriction-modification system, M subunit (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYE0_9FLAO
SCNpilot_BF_INOC_scaffold_358_5
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4002..5162
DNA (1161bp) protein (387aa)
Uncharacterized protein (Fragment) n=1 Tax=Myroides odoratimimus CCUG 10230 RepID=S2LP79_9FLAO
Restriction endonuclease S subunit {ECO:0000313|EMBL:KGO08827.1}; Flags: Fragment;; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.
restriction endonuclease S subunit
SCNpilot_BF_INOC_scaffold_358_6
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5167..6351)
DNA (1185bp) protein (395aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XEV7_CELAD
Uncharacterized protein {ECO:0000313|EMBL:GAE66354.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
restriction modification system DNA specificity domain-containing protein
SCNpilot_BF_INOC_scaffold_358_7
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6454..7380
DNA (927bp) protein (309aa)
Site-specific recombinase, phage integrase family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWD0_9FLAO
Putative site-specific recombinase {ECO:0000313|EMBL:GAE66353.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chrys
Integrase
SCNpilot_BF_INOC_scaffold_358_8
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7471..10338
DNA (2868bp) protein (956aa)
hsdR; type I restriction-modification system R subunit (EC:3.1.21.3) rbh
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWD1_9FLAO
Deoxyribonuclease HsdR {ECO:0000313|EMBL:KFC18898.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lac
SCNpilot_BF_INOC_scaffold_358_9
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10519..10788)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZD9_9FLAO
membrane protein
Membrane protein {ECO:0000313|EMBL:BAP33287.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StR
SCNpilot_BF_INOC_scaffold_358_10
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10866..13289)
DNA (2424bp) protein (808aa)
TonB-dependent siderophore receptor n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VY26_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:KFF27788.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
TonB-dependent siderophore receptor
SCNpilot_BF_INOC_scaffold_358_11
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13351..14226
DNA (876bp) protein (292aa)
Putative N-carbamoylputrescine amidase n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G2U6_9SPHI
Acyltransferase {ECO:0000313|EMBL:KFC20440.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
SCNpilot_BF_INOC_scaffold_358_12
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14342..15358
DNA (1017bp) protein (339aa)
Conserved uncharacterized protein, DUF1016 id=2042040 bin=GWE2_Bacteroidetes_40_15 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
Contig195, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74462.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=
hypothetical protein
SCNpilot_BF_INOC_scaffold_358_13
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15386..16477
DNA (1092bp) protein (364aa)
Putative agmatine deiminase {ECO:0000313|EMBL:KHJ38900.1}; EC=3.5.3.12 {ECO:0000313|EMBL:KHJ38900.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobact
agmatine deiminase (EC:3.5.3.12)
agmatine deiminase n=1 Tax=Pedobacter arcticus RepID=UPI0002E14BC2
SCNpilot_BF_INOC_scaffold_358_14
unknown

Not on your lists

16716..16901
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_358_15
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16946..17602)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E8_FLAB3
Protease {ECO:0000313|EMBL:KIA83237.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_358_16
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17646..17954)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E7_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07285.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain
SCNpilot_BF_INOC_scaffold_358_17
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17984..19345)
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E6_FLAB3
transporter
Uncharacterized protein {ECO:0000313|EMBL:ACU07284.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain
SCNpilot_BF_INOC_scaffold_358_18
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19494..21431)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EV14_EMTOG
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK03517.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotr
SCNpilot_BF_INOC_scaffold_358_19
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21445..21921)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XR59_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:KIC63869.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_358_20
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22106..22963)
DNA (858bp) protein (286aa)
ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E5_FLAB3
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=2667
SCNpilot_BF_INOC_scaffold_358_21
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23048..24625)
DNA (1578bp) protein (526aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase F0F1 subunit alpha (EC:3.6.3.14) rbh
ATP synthase subunit alpha n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E4_FLAB3
SCNpilot_BF_INOC_scaffold_358_22
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24644..25183)
DNA (540bp) protein (180aa)
ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E3_FLAB3
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
SCNpilot_BF_INOC_scaffold_358_23
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25186..25683)
DNA (498bp) protein (166aa)
ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E2_FLAB3
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
SCNpilot_BF_INOC_scaffold_358_24
unknown

Not on your lists

comp(25786..25956)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_358_25
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26026..27159)
DNA (1134bp) protein (378aa)
ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E0_FLAB3
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
SCNpilot_BF_INOC_scaffold_358_26
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27289..27714)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4D9_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA90761.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_358_27
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27698..27973)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4D8_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA90762.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_358_28
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


28113..29483
DNA (1371bp) protein (457aa)
Signal recognition particle protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4D6_FLAB3
Signal recognition particle, subunit Ffh SRP54
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteri
SCNpilot_BF_INOC_scaffold_358_29
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29577..30188)
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Riemerella anatipestifer RepID=E4TB76_RIEAD
Membrane protein {ECO:0000313|EMBL:KIC63879.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwane
ompW; OmpW protein
SCNpilot_BF_INOC_scaffold_358_30
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30320..30871)
DNA (552bp) protein (184aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CPJ9_9FLAO
Opacity protein {ECO:0000313|EMBL:KEY19970.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcti
uncharacterized protein
Displaying items 1-30 of 128 in total

View Taxonomy