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SCNpilot_BF_INOC_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_117_1
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(498..1553)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVB3_DELAC
hypothetical protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
SCNpilot_BF_INOC_scaffold_117_2
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3028..3519)
DNA (492bp) protein (164aa)
SsrA-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003451F4E
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria
SCNpilot_BF_INOC_scaffold_117_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3589..4065
DNA (477bp) protein (159aa)
Oligoketide cyclase/lipid transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6T9_9GAMM
oligoketide cyclase
Oligoketide cyclase {ECO:0000313|EMBL:AHX12869.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_117_4
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4052..4348
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QRC1_RALPI
hypothetical protein
UPF0125 protein N234_11350 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pic
SCNpilot_BF_INOC_scaffold_117_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4339..4755)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CC494
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
small protein A (tmRNA-binding)
SCNpilot_BF_INOC_scaffold_117_6
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4852..5262
DNA (411bp) protein (137aa)
Fur family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI0003604ECC
Fur family transcriptional regulator {ECO:0000313|EMBL:KFN46918.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Areni
Fur family transcriptional regulator
SCNpilot_BF_INOC_scaffold_117_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5754..8378
DNA (2625bp) protein (875aa)
M23 peptidase domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UKW9_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF85102.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
M23 peptidase domain-containing protein
SCNpilot_BF_INOC_scaffold_117_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8541..8963)
DNA (423bp) protein (141aa)
Endoribonuclease L-PSP n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQA4_9GAMM
Endoribonuclease L-PSP {ECO:0000313|EMBL:EIM01646.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter th
putative translation initiation inhibitor, yjgF family
SCNpilot_BF_INOC_scaffold_117_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8960..10342)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD68_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97409.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
SCNpilot_BF_INOC_scaffold_117_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10339..11847)
DNA (1509bp) protein (503aa)
2-hydroxymuconic semialdehyde dehydrogenase n=1 Tax=Dyella japonica RepID=UPI0002F5E7A4
2-hydroxymuconic semialdehyde dehydrogenase
2-hydroxymuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:AHX12450.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dy
SCNpilot_BF_INOC_scaffold_117_11
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11957..14131)
DNA (2175bp) protein (725aa)
peptidase M3 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B2EA1C
Dipeptidyl carboxypeptidase Dcp
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_117_12
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14253..15413
DNA (1161bp) protein (387aa)
acyl-CoA dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C9B07
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJV30296.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuen
acyl-CoA dehydrogenase
SCNpilot_BF_INOC_scaffold_117_13
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15490..17277)
DNA (1788bp) protein (596aa)
Putative sensor protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UU13_PSEUP
putative sensor protein
Putative sensor protein {ECO:0000313|EMBL:AER57447.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanth
SCNpilot_BF_INOC_scaffold_117_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17402..22339
DNA (4938bp) protein (1646aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036929F4
Glutamate dehydrogenase {ECO:0000313|EMBL:AHX12659.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
glutamate dehydrogenase
SCNpilot_BF_INOC_scaffold_117_15
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22466..23230
DNA (765bp) protein (255aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
NAD(+) kinase (EC:2.7.1.23)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372B3DC
SCNpilot_BF_INOC_scaffold_117_16
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

23416..24921
DNA (1506bp) protein (502aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin id=4646669 bin=GWF2_Lentisphaerae_57_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
peptidase S8/S53 subtilisin kexin sedolisin Tax=GWF2_Lentisphaerae_57_35_curated
peptidase S8/S53 subtilisin kexin sedolisin
SCNpilot_BF_INOC_scaffold_117_17
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24950..25888
DNA (939bp) protein (313aa)
5'-nucleotidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM83_9GAMM
5'-nucleotidase {ECO:0000313|EMBL:KGI78007.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
5'-nucleotidase
SCNpilot_BF_INOC_scaffold_117_18
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25966..26463
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E84E8
Uncharacterized protein {ECO:0000313|EMBL:KFN50841.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
SCNpilot_BF_INOC_scaffold_117_19
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26548..27375)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4072E
Uncharacterized protein {ECO:0000313|EMBL:KFN44686.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
hypothetical protein
SCNpilot_BF_INOC_scaffold_117_20
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27512..28684
DNA (1173bp) protein (391aa)
acyl-CoA dehydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E3596
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGO99369.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_BF_INOC_scaffold_117_21
Gilvimarinus chinensis, Gilvimarinus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28730..29278
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI000369250A
SCNpilot_BF_INOC_scaffold_117_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29347..31623
DNA (2277bp) protein (759aa)
Transketolase domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRH6_9GAMM
Transketolase domain-containing protein {ECO:0000313|EMBL:EIL89817.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
MFS transporter
SCNpilot_BF_INOC_scaffold_117_23
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31644..32537
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371A30F
Uncharacterized protein {ECO:0000313|EMBL:KFN47167.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli
adenylate/guanylate cyclase
SCNpilot_BF_INOC_scaffold_117_24
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(32661..34073)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9E5_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01883.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
SCNpilot_BF_INOC_scaffold_117_25
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34085..35926)
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9E4_CALAS
Uncharacterized protein {ECO:0000313|EMBL:EYR66187.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
conserved hypothetical protein
SCNpilot_BF_INOC_scaffold_117_26
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36102..37166)
DNA (1065bp) protein (355aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F74AA
SCNpilot_BF_INOC_scaffold_117_27
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37163..38197)
DNA (1035bp) protein (345aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dih
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C93CF
dihydroorotate dehydrogenase
SCNpilot_BF_INOC_scaffold_117_28
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38201..38482)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWQ6_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
membrane protein
SCNpilot_BF_INOC_scaffold_117_29
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38621..40153)
DNA (1533bp) protein (511aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWQ7_9GAMM
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHX12695.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
SCNpilot_BF_INOC_scaffold_117_30
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40484..41164
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037CBC85
Uracil-DNA glycosylase {ECO:0000313|EMBL:KJK21552.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
Hypothetical protein (sugar utilization related)
Displaying items 1-30 of 125 in total

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