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SCNpilot_BF_INOC_scaffold_118

Search features with annotation key words

Displaying items 61-90 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_118_61
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(61933..62124)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K7S2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00175.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_BF_INOC_scaffold_118_62
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62300..63742
DNA (1443bp) protein (481aa)
Putative Zn-dependent protease-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ27_9GAMM
Protease TldD {ECO:0000313|EMBL:KJV30864.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
tldD; protease TldD
SCNpilot_BF_INOC_scaffold_118_63
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63746..64276)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362590D
UPF0307 protein WQ53_03255 {ECO:0000256|HAMAP-Rule:MF_00765}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseud
hypothetical protein
SCNpilot_BF_INOC_scaffold_118_64
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64346..65701
DNA (1356bp) protein (452aa)
peptidase C69 n=1 Tax=Dyella ginsengisoli RepID=UPI0003455AC6
pmbA; peptidase PmbA
Peptidase PmbA {ECO:0000313|EMBL:AIF49064.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_118_65
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65772..66179
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV56_PSEUU
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:AKC85922.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Ps
hypothetical protein
SCNpilot_BF_INOC_scaffold_118_66
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66190..66975)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000369EF91
geranyl transferase
Geranyl transferase {ECO:0000313|EMBL:AHX14233.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_118_67
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67143..67397)
DNA (255bp) protein (85aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit id=2642050 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
exodeoxyribonuclease VII small subunit
SCNpilot_BF_INOC_scaffold_118_68
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67429..68754)
DNA (1326bp) protein (442aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003648FAD
tRNA(Ile)-lysidine synthetase
SCNpilot_BF_INOC_scaffold_118_69
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68780..69814)
DNA (1035bp) protein (345aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1379159 species="Bac
L-threonine 3-dehydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003688012
L-threonine 3-dehydrogenase
SCNpilot_BF_INOC_scaffold_118_70
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69893..71932)
DNA (2040bp) protein (680aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DB1CF4
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=CG_Beta_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_118_71
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72150..73094
DNA (945bp) protein (315aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLT5_9GAMM
tRNA isopentenyltransferase MiaA
SCNpilot_BF_INOC_scaffold_118_72
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73251..73508
DNA (258bp) protein (86aa)
RNA-binding protein Hfq n=1 Tax=Rhodanobacter denitrificans RepID=I4WV78_9GAMM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Areni
RNA chaperone Hfq
SCNpilot_BF_INOC_scaffold_118_73
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73590..74855
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036DEA46
GTP-binding proten HflX; K03665 GTP-binding protein HflX Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
GTP-binding proten HflX
SCNpilot_BF_INOC_scaffold_118_74
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74987..76126
DNA (1140bp) protein (380aa)
HflK protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDB8_9GAMM
HflK protein
HflK protein {ECO:0000313|EMBL:AGG88704.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
SCNpilot_BF_INOC_scaffold_118_75
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76128..76988
DNA (861bp) protein (287aa)
membane protease HflC n=1 Tax=Dyella japonica RepID=UPI0002DA5D8D
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
membane protease HflC
SCNpilot_BF_INOC_scaffold_118_76
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76995..77180
DNA (186bp) protein (62aa)
Membrane protein {ECO:0000313|EMBL:EYR65950.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;
Putative uncharacterized protein id=2755083 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_118_77
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77550..78842
DNA (1293bp) protein (431aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
adenylosuccinate synthetase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036561B0
adenylosuccinate synthase
SCNpilot_BF_INOC_scaffold_118_78
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

78986..79933
DNA (948bp) protein (316aa)
peptidase families S8 and S53 domain protein (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7MDX9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMQ94367.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
SCNpilot_BF_INOC_scaffold_118_79
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80674..82935
DNA (2262bp) protein (754aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1217721 species="Bacteria; Proteobacteria; Gam
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361CE44
exoribonuclease R
SCNpilot_BF_INOC_scaffold_118_80
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83048..83788
DNA (741bp) protein (247aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003603C84
23S rRNA methyltransferase
SCNpilot_BF_INOC_scaffold_118_81
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83926..84573
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D0331
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EIL99159.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonad
histidine kinase
SCNpilot_BF_INOC_scaffold_118_82
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84632..87379)
DNA (2748bp) protein (916aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1217721 species="Bacteria; Proteobacteria; Ga
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036FE417
ribonuclease E
SCNpilot_BF_INOC_scaffold_118_83
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87777..88745
DNA (969bp) protein (323aa)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000373768B
SCNpilot_BF_INOC_scaffold_118_84
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88752..90311)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000301C3E2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47873.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_118_85
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90325..90669)
DNA (345bp) protein (115aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
pterin-4a-carbinolamine dehydratase (EC:4.2.1.96)
pterin dehydratase n=1 Tax=Dyella ginsengisoli RepID=UPI00034DF1C6
SCNpilot_BF_INOC_scaffold_118_86
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90781..91374
DNA (594bp) protein (198aa)
Fe/S biogenesis protein NfuA n=1 Tax=Dyella ginsengisoli RepID=UPI000349D366
Fe/S biogenesis protein NfuA {ECO:0000256|HAMAP-Rule:MF_01637, ECO:0000256|SAAS:SAAS00035357}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
thioredoxin-like protein
SCNpilot_BF_INOC_scaffold_118_87
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91453..91812)
DNA (360bp) protein (120aa)
cytochrome C n=1 Tax=Dyella ginsengisoli RepID=UPI000347C515
Uncharacterized protein {ECO:0000313|EMBL:KFN44476.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
cytochrome c class I
SCNpilot_BF_INOC_scaffold_118_88
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91821..92147)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003716DF3
Uncharacterized protein {ECO:0000313|EMBL:KFN52344.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
Cytochrome c553
SCNpilot_BF_INOC_scaffold_118_89
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92446..93726
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036467E3
Uncharacterized protein {ECO:0000313|EMBL:KFN52343.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
RND family efflux transporter MFP subunit
SCNpilot_BF_INOC_scaffold_118_90
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93723..97064
DNA (3342bp) protein (1114aa)
transporter n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B66A16
acriflavin resistance protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Displaying items 61-90 of 150 in total

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