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SCNpilot_BF_INOC_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_118_1
unknown

Not on your lists

328..708
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_118_2
Shewanella violacea, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(733..1104)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZJN5_SHEVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ01884.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea (
SCNpilot_BF_INOC_scaffold_118_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1201..1674
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003485D26
OsmC-like protein {ECO:0000313|EMBL:KFC73521.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
OsmC family protein
SCNpilot_BF_INOC_scaffold_118_4
unknown

Not on your lists

1723..2085
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_118_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2438..2941
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002EE674C
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_118_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3185..3745
DNA (561bp) protein (187aa)
RibD domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CZA3_MYXXD
riboflavin biosynthesis protein RibD domain-containing protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
riboflavin biosynthesis protein RibD domain-containing protein
SCNpilot_BF_INOC_scaffold_118_7
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4995..5903
DNA (909bp) protein (303aa)
sulfate adenylyltransferase, small subunit (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Sulfate adenylyltransferase subunit 2 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNE0_PSEUP
sulfate adenylyltransferase subunit 2
SCNpilot_BF_INOC_scaffold_118_8
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5903..7852
DNA (1950bp) protein (650aa)
sulfate adenylyltransferase, large subunit (EC:2.7.1.25 2.7.7.4); K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] Tax=GWF1_Xanthomonadales_69_6_curated
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (EC:2.7.1.25 2.7.7.4)
Sulfate adenylyltransferase, large subunit id=2841973 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCNpilot_BF_INOC_scaffold_118_9
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7867..8574
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E6FAE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
hypothentical membrane protein of unknown function
SCNpilot_BF_INOC_scaffold_118_10
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8752..8982)
DNA (231bp) protein (77aa)
Hexameric tyrosine-coordinated heme protein (HTHP) n=1 Tax=Pseudomonas caeni RepID=UPI0003B75256
NODE_59, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ95956.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
response regulator receiver
SCNpilot_BF_INOC_scaffold_118_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9370..10836
DNA (1467bp) protein (489aa)
cytochrome oxidase subunit I n=1 Tax=Dyella ginsengisoli RepID=UPI000347200A
cbb3-type cytochrome c oxidase subunit I
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:AHX13105.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyell
SCNpilot_BF_INOC_scaffold_118_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10847..11512
DNA (666bp) protein (222aa)
peptidase S41 n=1 Tax=Dyella ginsengisoli RepID=UPI0003498BE3
cytochrome c oxidase, cbb3-type, subunit II Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
cytochrome c oxidase, cbb3-type, subunit II
SCNpilot_BF_INOC_scaffold_118_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11509..11694
DNA (186bp) protein (62aa)
Cytochrome c oxidase subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWE3_9GAMM
Cytochrome c oxidase subunit {ECO:0000313|EMBL:EIM03785.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
ccoQ; cytochrome c oxidase subunit
SCNpilot_BF_INOC_scaffold_118_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11691..12617
DNA (927bp) protein (309aa)
cytochrome-cbb3 oxidase subunit III n=1 Tax=Dyella ginsengisoli RepID=UPI00034D368E
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
cytochrome c oxidase, cbb3-type, subunit III
SCNpilot_BF_INOC_scaffold_118_15
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12819..15287
DNA (2469bp) protein (823aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A11AA
Uncharacterized protein {ECO:0000313|EMBL:KGI78378.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
heavy metal translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_118_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15284..15529
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D0084
cytochrome oxidase maturation protein, cbb3-type Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
cytochrome oxidase maturation protein, cbb3-type
SCNpilot_BF_INOC_scaffold_118_17
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15720..15914
DNA (195bp) protein (65aa)
stress-responsive transcriptional regulator n=1 Tax=Xanthomonas sacchari RepID=UPI000262B4EE
Stress-responsive transcriptional regulator {ECO:0000313|EMBL:KGM55671.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source
stress-responsive transcriptional regulator
SCNpilot_BF_INOC_scaffold_118_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16497..17585)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000378E383
Ribonuclease D {ECO:0000313|EMBL:EIL97475.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydan
ribonuclease D
SCNpilot_BF_INOC_scaffold_118_19
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17703..19616
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F7F09
Sulfatase-modifying factor protein {ECO:0000313|EMBL:KJV32041.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteiba
sulfatase-modifying factor protein
SCNpilot_BF_INOC_scaffold_118_20
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19741..20646
DNA (906bp) protein (302aa)
peptidase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B598B6
Uncharacterized protein {ECO:0000313|EMBL:KFN44570.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
peptidase
SCNpilot_BF_INOC_scaffold_118_21
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21050..21529)
DNA (480bp) protein (160aa)
peroxiredoxin oxidoreductase (EC:1.11.1.15) Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E86FA
peroxiredoxin
SCNpilot_BF_INOC_scaffold_118_22
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21673..22119
DNA (447bp) protein (149aa)
Low molecular weight heat shock protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKD3_9GAMM
molecular chaperone (small heat shock protein)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_118_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22198..23091
DNA (894bp) protein (298aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6L0_9GAMM
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:EIL95101.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
DnaJ-class molecular chaperone with C-terminal Zn finger domain
SCNpilot_BF_INOC_scaffold_118_24
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23153..23518)
DNA (366bp) protein (122aa)
PilH family regulatory protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP49_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
SCNpilot_BF_INOC_scaffold_118_25
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23597..24589)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372BBEB
quinone oxidoreductase
Quinone oxidoreductase {ECO:0000313|EMBL:AHX12807.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
SCNpilot_BF_INOC_scaffold_118_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24675..24791)
DNA (117bp) protein (39aa)
endonuclease n=1 Tax=Dyella ginsengisoli RepID=UPI0003759665
putative endonuclease containing a URI domain
Excinuclease ABC C subunit domain-containing protein {ECO:0000313|EMBL:EIL97270.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
SCNpilot_BF_INOC_scaffold_118_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24864..24980)
DNA (117bp) protein (39aa)
Excinuclease ABC C subunit domain-containing protein {ECO:0000313|EMBL:EIL89736.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
SCNpilot_BF_INOC_scaffold_118_28
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25246..26670)
DNA (1425bp) protein (475aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W987_9GAMM
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_118_29
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26783..27985)
DNA (1203bp) protein (401aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
dihydrolipoamide succinyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000346827C
dihydrolipoamide succinyltransferase
SCNpilot_BF_INOC_scaffold_118_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28039..30927)
DNA (2889bp) protein (963aa)
2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:AGG88640.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AGG88640.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036FC7A0
Displaying items 1-30 of 150 in total

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