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SCNpilot_BF_INOC_scaffold_20

Search features with annotation key words

Displaying items 121-150 of 281 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_20_121
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137991..138671)
DNA (681bp) protein (227aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F73489
7-cyano-7-deazaguanine synthase
SCNpilot_BF_INOC_scaffold_20_122
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138835..139524)
DNA (690bp) protein (230aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYN6_9GAMM
putative radical SAM-superfamily protein
SCNpilot_BF_INOC_scaffold_20_123
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139547..140464)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374820C
tol-pal system protein
Tol-pal system protein {ECO:0000313|EMBL:AHX14505.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
SCNpilot_BF_INOC_scaffold_20_124
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140464..140976)
DNA (513bp) protein (171aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L146_FRAAD
peptidoglycan-associated lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:AFC87201.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria
SCNpilot_BF_INOC_scaffold_20_125
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141081..142391)
DNA (1311bp) protein (437aa)
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenim
Protein TolB id=2509524 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tol-Pal system beta propeller repeat-containing protein TolB
SCNpilot_BF_INOC_scaffold_20_126
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142398..143297)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037417E4
Uncharacterized protein {ECO:0000313|EMBL:KGI77014.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
cell envelope protein TolA
SCNpilot_BF_INOC_scaffold_20_127
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143303..143746)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003630222
Biopolymer transporter TolR {ECO:0000313|EMBL:KGI77015.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimon
Cell division and transport-associated protein TolR
SCNpilot_BF_INOC_scaffold_20_128

Not on your lists

comp(143825..144505)
DNA (681bp) protein (227aa)
Colicin uptake protein TolQ n=1 Tax=mine drainage metagenome RepID=T0ZWC7_9ZZZZ
Colicin uptake protein TolQ {ECO:0000313|EMBL:EQD52531.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
TolQ protein
SCNpilot_BF_INOC_scaffold_20_129

Not on your lists

comp(144502..144921)
DNA (420bp) protein (140aa)
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:EQD65825.1}; EC=3.1.2.- {ECO:0000313|EMBL:EQD65825.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metageno
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=mine drainage metagenome RepID=T1CFS2_9ZZZZ
4-hydroxybenzoyl-CoA thioesterase
SCNpilot_BF_INOC_scaffold_20_130
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144959..146005)
DNA (1047bp) protein (349aa)
ruvB; ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteri
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VY12_9GAMM
SCNpilot_BF_INOC_scaffold_20_131

Not on your lists

comp(146167..148056)
DNA (1890bp) protein (630aa)
Potassium transporter n=4 Tax=mine drainage metagenome RepID=T1CFV1_9ZZZZ
Potassium transporter {ECO:0000313|EMBL:EQD65880.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
K+ transporter
SCNpilot_BF_INOC_scaffold_20_132
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148182..148772)
DNA (591bp) protein (197aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction DNA helicase RuvA n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B53938
ATP-dependent DNA helicase RuvA
SCNpilot_BF_INOC_scaffold_20_133
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148769..149290)
DNA (522bp) protein (174aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L155_FRAAD
crossover junction endodeoxyribonuclease RuvC
SCNpilot_BF_INOC_scaffold_20_134
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149287..149931)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAK6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI77021.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
lysophospholipase
SCNpilot_BF_INOC_scaffold_20_135
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(149966..151861)
DNA (1896bp) protein (632aa)
aspartyl-tRNA synthetase n=1 Tax=Dyella japonica RepID=UPI00032003FD
aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHX14518.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis
SCNpilot_BF_INOC_scaffold_20_136
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152054..152602)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F6FF63
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX14519.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_BF_INOC_scaffold_20_137
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152671..152994)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003721B8B
FmdB family regulatory protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_20_138
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153163..155739)
DNA (2577bp) protein (859aa)
Chaperone protein ClpB id=2463881 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
ATP-dependent chaperone ClpB Tax=GWF1_Xanthomonadales_69_6_curated
ATP-dependent chaperone ClpB
SCNpilot_BF_INOC_scaffold_20_139
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155906..157546)
DNA (1641bp) protein (547aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Two-component system, sensor protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXG8_9GAMM
histidine kinase
SCNpilot_BF_INOC_scaffold_20_140
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158000..159166
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXG6_9GAMM
SCNpilot_BF_INOC_scaffold_20_141
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159214..160086
DNA (873bp) protein (291aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
succinyl-CoA synthetase subunit alpha n=1 Tax=Rudaea cellulosilytica RepID=UPI000360CD0C
SCNpilot_BF_INOC_scaffold_20_142
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160247..162445
DNA (2199bp) protein (733aa)
Serine/threonine protein kinase (EC:2.7.11.1)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B67ED9
Uncharacterized protein {ECO:0000313|EMBL:KGM56039.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
SCNpilot_BF_INOC_scaffold_20_143
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162601..164244
DNA (1644bp) protein (548aa)
NAD synthetase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A88F2
Uncharacterized protein {ECO:0000313|EMBL:KFN51250.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
nadE; NAD synthetase
SCNpilot_BF_INOC_scaffold_20_144
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164264..165127)
DNA (864bp) protein (288aa)
Outer membrane protein assembly factor BamD n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAJ1_9GAMM
membrane protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_20_145
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165311..166264
DNA (954bp) protein (318aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000375A419
SCNpilot_BF_INOC_scaffold_20_146
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166264..167019
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZI4_9GAMM
uncharacterized protein, YfiH family Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
uncharacterized protein, YfiH family
SCNpilot_BF_INOC_scaffold_20_147
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167101..168126
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376DFF
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_20_148
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168246..169682
DNA (1437bp) protein (479aa)
chemotaxis protein CheY n=1 Tax=Dyella japonica RepID=UPI0002E07436
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AHX14555.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_BF_INOC_scaffold_20_149
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169841..170509
DNA (669bp) protein (223aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
signal peptidase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00037FCD5B
signal peptidase
SCNpilot_BF_INOC_scaffold_20_150
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170603..171598
DNA (996bp) protein (332aa)
phosphate starvation protein PhoH n=1 Tax=Dyella japonica RepID=UPI0002D6A824
PhoH
PhoH {ECO:0000313|EMBL:AHX12286.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Displaying items 121-150 of 281 in total

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