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SCNpilot_BF_INOC_scaffold_20

Search features with annotation key words

Displaying items 91-120 of 281 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_20_91
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94566..96017)
DNA (1452bp) protein (484aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:KGI77363.1}; EC=4.2.1.79 {ECO:0000313|EMBL:KGI77363.1};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV3_9GAMM
SCNpilot_BF_INOC_scaffold_20_92
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96247..98265
DNA (2019bp) protein (673aa)
fadH; 2,4-dienoyl-CoA reductase (EC:1.3.1.34)
NADH:flavin oxidoreductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7T5_9GAMM
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EIL95526.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
SCNpilot_BF_INOC_scaffold_20_93
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98431..101316
DNA (2886bp) protein (962aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI0003605204
BNR/Asp-box repeat protein {ECO:0000313|EMBL:GAM11402.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. O
hypothetical protein
SCNpilot_BF_INOC_scaffold_20_94
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101380..101988
DNA (609bp) protein (203aa)
Putative glutathione S-transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W2R4_9GAMM
Putative glutathione S-transferase {ECO:0000313|EMBL:EIL93755.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
glutathione S-transferase
SCNpilot_BF_INOC_scaffold_20_95
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102058..103206)
DNA (1149bp) protein (383aa)
prpC; methylcitrate synthase (EC:2.3.3.5)
methylcitrate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036877BF
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
SCNpilot_BF_INOC_scaffold_20_96
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103263..104153)
DNA (891bp) protein (297aa)
prpB; 2-methylisocitrate lyase (EC:4.1.3.32); K03417 methylisocitrate lyase [EC:4.1.3.30] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
prpB; methylisocitrate lyase (EC:4.1.3.30)
2-methylisocitrate lyase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMG5_9GAMM
SCNpilot_BF_INOC_scaffold_20_97
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104286..105455)
DNA (1170bp) protein (390aa)
UPI0003CF44CE related cluster n=2 Tax=unknown RepID=UPI0003CF44CE
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
Na+/H+ antiporter NhaA
SCNpilot_BF_INOC_scaffold_20_98
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105621..106604)
DNA (984bp) protein (328aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDC6_9GAMM
SCNpilot_BF_INOC_scaffold_20_99
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106634..107005)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000361FB28
Strain MEJ086 contig_110, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89119.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomona
glutaredoxin
SCNpilot_BF_INOC_scaffold_20_100
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107002..108198)
DNA (1197bp) protein (399aa)
aminotransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B54739
Aminotransferase {ECO:0000313|EMBL:KGM54139.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis G
aspartate/tyrosine/aromatic aminotransferase
SCNpilot_BF_INOC_scaffold_20_101
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108399..108674
DNA (276bp) protein (92aa)
Transglycosylase-associated protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8V5_VARPE
transglycosylase-associated protein
Transglycosylase-associated protein {ECO:0000313|EMBL:ADU36177.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_BF_INOC_scaffold_20_102
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108761..111130
DNA (2370bp) protein (790aa)
Penicillin-binding protein 1C n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UUE2_PSEUP
penicillin-binding protein 1C
Penicillin-binding protein 1C {ECO:0000313|EMBL:AER56233.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseud
SCNpilot_BF_INOC_scaffold_20_103
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111189..111671
DNA (483bp) protein (161aa)
UPF0234 protein N787_06370 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas
putative nucleotide-binding protein id=2739864 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas sacchari genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
nucleotide-binding protein
SCNpilot_BF_INOC_scaffold_20_104
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111668..115012)
DNA (3345bp) protein (1115aa)
Multi-sensor hybrid histidine kinase id=2528229 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
signal transduction histidine kinase Tax=GWF1_Xanthomonadales_69_6_curated
histidine kinase
SCNpilot_BF_INOC_scaffold_20_105
unknown

Not on your lists

comp(114997..115152)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_20_106
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115297..116388)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034AAB2D
Poly (3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:EIL91453.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
poly (3-hydroxybutyrate) depolymerase (PhaZ)
SCNpilot_BF_INOC_scaffold_20_107
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116388..118625)
DNA (2238bp) protein (746aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW63_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL91454.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_20_108
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118801..120198
DNA (1398bp) protein (466aa)
H+/gluconate symporter family protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Citrate transporter id=2528239 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
H+/gluconate symporter family protein
SCNpilot_BF_INOC_scaffold_20_109
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(120734..124321)
DNA (3588bp) protein (1196aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZ09_HERA2
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ABX07049.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herp
SCNpilot_BF_INOC_scaffold_20_110
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124738..126843)
DNA (2106bp) protein (702aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=116228
Polyribonucleotide nucleotidyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9A2_9GAMM
polynucleotide phosphorylase/polyadenylase
SCNpilot_BF_INOC_scaffold_20_111
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(127009..127278)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037058A5
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frat
SCNpilot_BF_INOC_scaffold_20_112
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127445..128359)
DNA (915bp) protein (305aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKE4_9GAMM
SCNpilot_BF_INOC_scaffold_20_113
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128365..128712)
DNA (348bp) protein (116aa)
ribosome-binding factor A n=1 Tax=Dyella japonica RepID=UPI0002F4A926
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dye
SCNpilot_BF_INOC_scaffold_20_114

Not on your lists

comp(128854..131478)
DNA (2625bp) protein (875aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000375ED9F
Translation initiation factor IF-2 {ECO:0000313|EMBL:EQD29035.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
bacterial translation initiation factor 2 (bIF-2)
SCNpilot_BF_INOC_scaffold_20_115
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131568..133052)
DNA (1485bp) protein (495aa)
peptidase M54 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CCB0B
NusA antitermination factor
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_BF_INOC_scaffold_20_116
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133086..133613)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D7083
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
ribosome maturation protein RimP
SCNpilot_BF_INOC_scaffold_20_117
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133972..134451)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NBR1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI77285.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
SCNpilot_BF_INOC_scaffold_20_118
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(134514..135185)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8V0_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC60054.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
SCNpilot_BF_INOC_scaffold_20_119
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135270..136730
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374A70E
Transcriptional regulator {ECO:0000313|EMBL:KGM53900.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daeje
GntR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_20_120
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136941..137498
DNA (558bp) protein (186aa)
FeS assembly SUF system protein SufT n=1 Tax=Rudaea cellulosilytica RepID=UPI0003679EC6
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:KJV30881.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Lutei
hypothetical protein
Displaying items 91-120 of 281 in total

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