ggKbase home page

SCNpilot_BF_INOC_scaffold_20_112

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(127445..128359)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 305.0
  • Bit_score: 380
  • Evalue 2.50e-102
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 305.0
  • Bit_score: 373
  • Evalue 8.10e-101
tRNA pseudouridine synthase B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKE4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 305.0
  • Bit_score: 381
  • Evalue 6.20e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
GTGCGGCGCGCGGCAAAGATTCGTTGGCGCGATGTCCACGGCATCCTGTTGCTCGACAAGCCGCAAGGCTTGAGTTCAAACCAGGCCTTGCAGAAAGCACGGCTGCTTTTCAGGGCAGCCAAGGGCGGACATACCGGCAGCCTGGATCCACTGGCCACCGGCCTCTTGCCCTTGTGTTTTGGCGAGGCCACCAAGATTGCCGGGCTGCTGATCGGATCAAGCAAGGCGTACGAAACCGAATGCATGCTGGGCGTGAATACGGACAGTGCCGATGCCGCGGGCAAGGTCATCGAGATGCGGCCAGTCCCGGAGATCAGCGAGCAGATGATCGAAAGCGCGCTGGCACCATTGCGTGGCACGATCCAGCAGGTTCCGCCCATCTACTCGGCGCTCAAGCGCGACGGCGAGCGTCTTTACCAGCGCGCCCGCCGTGGCGAGGACATCGAGATCGACGCACGCGAAGTCGAGGTGCATCGGTTTGAGCTGCTTGAGCGACAGGGCGACCGCCTTCGCCTGCACGTCGAATGCGGCTCCGGCACCTATGTGCGCAGCCTGGTGCGCGATCTCGGCGAAGCGCTCGGCTGTGGCGCGCATGTGACCGCCTTGCGCAGACTTTGGGTGGAACCATTTCGTGCGCCGCGGATGCACACGCTGGCCGAACTGGAAGAGGCAGCGGCCGCGGGCGGCGAGGCGCTCGACAGCCTGCTGTTGCCCATCGAGGCAGGCCTGATCGGCTATCCGGAAACGATCCTCGATGAGACCGACAGCGCCAGACTGCGTCAGGGGCAAGCTGTTCAGGTTTCCGCTTCGCCTGGAATCTGCCTGGCCAGATCCAGCACGGGGCGCCTGCTGGCGGTGGCGGAAACGGGATCAGACGGGCTTTTGCGGGTGTTGCGCGGCTTCAATCTGGACTGA
PROTEIN sequence
Length: 305
VRRAAKIRWRDVHGILLLDKPQGLSSNQALQKARLLFRAAKGGHTGSLDPLATGLLPLCFGEATKIAGLLIGSSKAYETECMLGVNTDSADAAGKVIEMRPVPEISEQMIESALAPLRGTIQQVPPIYSALKRDGERLYQRARRGEDIEIDAREVEVHRFELLERQGDRLRLHVECGSGTYVRSLVRDLGEALGCGAHVTALRRLWVEPFRAPRMHTLAELEEAAAAGGEALDSLLLPIEAGLIGYPETILDETDSARLRQGQAVQVSASPGICLARSSTGRLLAVAETGSDGLLRVLRGFNLD*