ggKbase home page

SCNpilot_BF_INOC_scaffold_206

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_206_1
unknown

Not on your lists

1..672
DNA (672bp) protein (224aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_206_2
unknown

Not on your lists

715..918
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_206_3

Not on your lists

911..1393
DNA (483bp) protein (161aa)
Heat shock protein DnaJ-like protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EV40_9ALTE
molecular chaperone DnaJ
Uncharacterized protein {ECO:0000313|EMBL:KKN09717.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_BF_INOC_scaffold_206_4
unknown

Not on your lists

1759..3192
DNA (1434bp) protein (478aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_206_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3351..5576)
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WFK1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38066.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_BF_INOC_scaffold_206_6
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5883..6866
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XAT0_9ALTE
Transposase {ECO:0000313|EMBL:KEQ12068.1}; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas montiporae.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_206_7
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7561..9123
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036965C8
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_206_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9212..11584)
DNA (2373bp) protein (791aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
phosphoenolpyruvate synthase (EC:2.7.9.2)
phosphoenolpyruvate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003721C53
SCNpilot_BF_INOC_scaffold_206_9
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11695..12996)
DNA (1302bp) protein (434aa)
hypothetical protein
Putative uncharacterized protein id=2528220 bin=GWF1_Xanthomonadales_69_6 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_BF_INOC_scaffold_206_10
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13135..13950
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CCD61
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Sho
PEP synthetase regulatory protein
SCNpilot_BF_INOC_scaffold_206_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14070..14564
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348767B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48365.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_206_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15179..15634
DNA (456bp) protein (152aa)
ATPase n=1 Tax=Dyella japonica RepID=UPI0002FBFEA4
rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:AHX13807.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jian
SCNpilot_BF_INOC_scaffold_206_13
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15737..17293)
DNA (1557bp) protein (519aa)
Uncharacterized protein (Fragment) n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RN58_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMI16807.1}; Flags: Fragment;; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source=
hypothetical protein
SCNpilot_BF_INOC_scaffold_206_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17327..19339)
DNA (2013bp) protein (671aa)
5'-nucleotidase domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCC6_9GAMM
5'-nucleotidase domain-containing protein {ECO:0000313|EMBL:EIL97117.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase
SCNpilot_BF_INOC_scaffold_206_15
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19479..20882
DNA (1404bp) protein (468aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1217721 species="Bacteria; P
glutaminyl-tRNA synthetase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036484F0
glutamyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_206_16
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20887..21288
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:AHX13804.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_BF_INOC_scaffold_206_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21352..21843
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365E5FC
Fur family transcriptional regulator
Fur family transcriptional regulator {ECO:0000313|EMBL:AIF48547.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella ja
SCNpilot_BF_INOC_scaffold_206_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21954..22400
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D9C618
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48546.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_206_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22482..23441
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C2874
zinc transporter ZitB
Zinc transporter ZitB {ECO:0000313|EMBL:AHX13801.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_206_20
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23516..23710
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A6E97
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_206_21
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23773..24762)
DNA (990bp) protein (330aa)
patatin-like phospholipase (EC:3.4.21.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C25BD
Patatin {ECO:0000313|EMBL:ENO86140.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
SCNpilot_BF_INOC_scaffold_206_22
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24759..25955)
DNA (1197bp) protein (399aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
imidazolonepropionase (EC:3.5.2.7)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370EA68
SCNpilot_BF_INOC_scaffold_206_23
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26149..27582
DNA (1434bp) protein (478aa)
formimidoylglutamate deiminase (EC:3.5.3.13) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C9E64
N-formimino-L-glutamate deiminase
SCNpilot_BF_INOC_scaffold_206_24
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27560..28831)
DNA (1272bp) protein (424aa)
Type I phosphodiesterase/nucleotide pyrophosphatase family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8P3_PHEZH
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:ACG77670.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae
SCNpilot_BF_INOC_scaffold_206_25
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(28942..29997)
DNA (1056bp) protein (352aa)
Uncharacterized protein Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
SCNpilot_BF_INOC_scaffold_206_26
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30314..31141
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037DA183
transmembrane protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_206_27
unknown

Not on your lists

31138..31896
DNA (759bp) protein (253aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_206_28
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31893..33827
DNA (1935bp) protein (645aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase (EC:4.2.1.49)
urocanate hydratase n=1 Tax=Dyella ginsengisoli RepID=UPI00034DDB50
SCNpilot_BF_INOC_scaffold_206_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34679..35383
DNA (705bp) protein (235aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NF17_9GAMM
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGG89404.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
SCNpilot_BF_INOC_scaffold_206_30
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35460..35855)
DNA (396bp) protein (132aa)
membrane protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B33903
NODE_59, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ95958.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
eicosanoid/glutathione metabolism membrane-associated protein
Displaying items 1-30 of 139 in total

View Taxonomy