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SCNpilot_BF_INOC_scaffold_221

Search features with annotation key words

Displaying items 211-238 of 238 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_221_211
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227716..228678)
DNA (963bp) protein (321aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
thioredoxin reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DDB62
thioredoxin reductase
SCNpilot_BF_INOC_scaffold_221_212
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

228947..230014
DNA (1068bp) protein (356aa)
Alanine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W730_9GAMM
Alanine dehydrogenase {ECO:0000313|EMBL:EIL95271.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spa
alanine dehydrogenase
SCNpilot_BF_INOC_scaffold_221_213
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230060..232381
DNA (2322bp) protein (774aa)
DNA segregation ATPase FtsK n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W731_9GAMM
DNA segregation ATPase FtsK {ECO:0000313|EMBL:EIL95272.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
DNA segregation ATPase, FtsK/SpoIIIE family
SCNpilot_BF_INOC_scaffold_221_214

Not on your lists

232476..233126
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379ABA4
Marine sediment metagenome DNA, contig: S03H2_L01291 {ECO:0000313|EMBL:GAH46909.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cell envelope biogenesis protein LolA
SCNpilot_BF_INOC_scaffold_221_215
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233276..233683
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003693BAA
MerR family transcriptional regulator {ECO:0000313|EMBL:AKC87088.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source
putative transcriptional regulator
SCNpilot_BF_INOC_scaffold_221_216
unknown

Not on your lists

233680..234198
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_221_217
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234319..235668
DNA (1350bp) protein (450aa)
ATPase AAA n=1 Tax=Dyella japonica RepID=UPI00035FF992
recombination factor protein RarA
Recombination factor protein RarA {ECO:0000313|EMBL:AHX13565.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiang
SCNpilot_BF_INOC_scaffold_221_218
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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235665..237221
DNA (1557bp) protein (519aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFOXYA1_FULL_Rhodanobacter
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZZ4_9GAMM
D-alanyl-D-alanine carboxypeptidase
SCNpilot_BF_INOC_scaffold_221_219
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237296..237868
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003769D12
Uncharacterized protein {ECO:0000313|EMBL:EIL95277.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_221_220
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238007..239284
DNA (1278bp) protein (426aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTQ8_PSEUU
SCNpilot_BF_INOC_scaffold_221_221
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

239999..240241
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YGF4_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EAS49271.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing
DUF3297 family protein
SCNpilot_BF_INOC_scaffold_221_222
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240294..241238
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344EF09
glutaminase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_221_223
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241258..242439)
DNA (1182bp) protein (394aa)
transporter n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6BFC5
Uncharacterized protein {ECO:0000313|EMBL:KFN50142.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
hypothetical protein
SCNpilot_BF_INOC_scaffold_221_224
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242588..244216)
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000347FFFB
FAD dependent oxidoreductase {ECO:0000313|EMBL:EZP34960.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinob
putative uncharacterized protein VP0956
SCNpilot_BF_INOC_scaffold_221_225

Not on your lists

comp(244250..245431)
DNA (1182bp) protein (394aa)
NAD(FAD)-utilizing dehydrogenase n=2 Tax=mine drainage metagenome RepID=T1A5N0_9ZZZZ
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:EQD37140.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
membrane protein
SCNpilot_BF_INOC_scaffold_221_226
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245421..245993)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPA7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX14080.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_BF_INOC_scaffold_221_227
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246195..247433
DNA (1239bp) protein (413aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Two-component system sensor histidine kinase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZFG1_XANCT
regS; two-component system sensor protein
SCNpilot_BF_INOC_scaffold_221_228
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247430..247981
DNA (552bp) protein (184aa)
Putative transcriptional regulator ycf27 n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SVW9_XANCT
Chemotaxis protein CheY {ECO:0000313|EMBL:KGM56048.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
two-component system regulatory protein
SCNpilot_BF_INOC_scaffold_221_229
unknown

Not on your lists

comp(248021..248674)
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_221_230
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248883..249932
DNA (1050bp) protein (350aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AHY60719.1}; EC=2.7.7.1 {ECO:0000313|EMBL:AHY60719.1};; EC=3.6.1.- {ECO:0000313|EMBL:AHY60719.1};; TaxID=216778 species="Bacteria; Proteobacteria; Gammapro
bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase (EC:3.6.1.-)
Cytidyltransferase-related domain protein n=3 Tax=Stenotrophomonas maltophilia RepID=G0K4J7_STEMA
SCNpilot_BF_INOC_scaffold_221_231
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

249993..251417
DNA (1425bp) protein (475aa)
nicotinate phosphoribosyltransferase n=2 Tax=Xanthomonas RepID=UPI00035CC40E
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:EYR67108.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysob
nicotinate phosphoribosyltransferase rbh
SCNpilot_BF_INOC_scaffold_221_232
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

251511..252539
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8A3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFN48527.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
hypothetical protein
SCNpilot_BF_INOC_scaffold_221_233
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252529..253464
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DAE35
Uncharacterized protein {ECO:0000313|EMBL:KFN48526.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
hypothetical protein
SCNpilot_BF_INOC_scaffold_221_234
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(253528..254865)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2K1_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN84170.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2
SCNpilot_BF_INOC_scaffold_221_235

Not on your lists

comp(254862..255872)
DNA (1011bp) protein (337aa)
Uncharacterized protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1AYU2_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQD61523.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_BF_INOC_scaffold_221_236
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255876..257735)
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DUH9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EIL90933.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_221_237
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(257716..258408)
DNA (693bp) protein (231aa)
Uncharacterized protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T0ZUQ6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGO99722.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvi
hypothetical protein
SCNpilot_BF_INOC_scaffold_221_238
unknown

Not on your lists

259386..260354
DNA (969bp) protein (323aa)

This feature has no annotations

Displaying items 211-238 of 238 in total

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