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SCNpilot_BF_INOC_scaffold_221

Search features with annotation key words

Displaying items 121-150 of 238 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_221_121
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135891..136862
DNA (972bp) protein (324aa)
branched-chain amino acid aminotransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000349C9DA
branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AHX15453.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dye
SCNpilot_BF_INOC_scaffold_221_122
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136859..138268
DNA (1410bp) protein (470aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L1B1_FRAAD
3-isopropylmalate dehydratase large subunit
SCNpilot_BF_INOC_scaffold_221_123
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138265..138870
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L1B2_FRAAD
3-isopropylmalate dehydratase small subunit
SCNpilot_BF_INOC_scaffold_221_124
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138867..139934
DNA (1068bp) protein (356aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI000362F713
3-isopropylmalate dehydrogenase
SCNpilot_BF_INOC_scaffold_221_125
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139931..141616
DNA (1686bp) protein (562aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B364A1
SCNpilot_BF_INOC_scaffold_221_126
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141657..142640
DNA (984bp) protein (328aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003663A40
ketol-acid reductoisomerase
SCNpilot_BF_INOC_scaffold_221_127
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142682..144559
DNA (1878bp) protein (626aa)
acetolactate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003760FB8
acetolactate synthase
Acetolactate synthase {ECO:0000313|EMBL:AIF46218.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_221_128
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144559..145086
DNA (528bp) protein (176aa)
acetolactate synthase, small (regulatory) subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T1P8_9GAMM
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EIT67583.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source=
SCNpilot_BF_INOC_scaffold_221_129
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145103..145882)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037C2C8E
PDZ/DHR/GLGF domain-containing protein {ECO:0000313|EMBL:GAO21232.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
SCNpilot_BF_INOC_scaffold_221_130
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145940..146809
DNA (870bp) protein (290aa)
hypothetical protein, partial n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375EAB
Membrane protein {ECO:0000313|EMBL:KGM53348.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis G
hypothetical protein
SCNpilot_BF_INOC_scaffold_221_131
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146856..147524)
DNA (669bp) protein (223aa)
Cation transport regulator protein ChaC n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PG15_9BURK
Cation transport regulator protein ChaC {ECO:0000313|EMBL:ELX09813.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" sour
chaC; cation transport regulator protein
SCNpilot_BF_INOC_scaffold_221_132
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147764..148717
DNA (954bp) protein (318aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SJ47_STRM5
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACF50215.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotropho
SCNpilot_BF_INOC_scaffold_221_133

Not on your lists

148714..149403
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BP16_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD75747.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycosyl transferase family protein
SCNpilot_BF_INOC_scaffold_221_134
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149432..151555
DNA (2124bp) protein (708aa)
Uncharacterized protein n=4 Tax=Xylella fastidiosa RepID=Q87BB9_XYLFT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC47565.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchar
SCNpilot_BF_INOC_scaffold_221_135
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151841..153337
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RCF6_KANKD
Uncharacterized protein {ECO:0000313|EMBL:AKE51881.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojedon
hypothetical protein
SCNpilot_BF_INOC_scaffold_221_136
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153411..154043
DNA (633bp) protein (211aa)
membrane protein n=1 Tax=Xanthomonas sacchari RepID=UPI0002629555
NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96511.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
membrane protein
SCNpilot_BF_INOC_scaffold_221_137
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154037..155272)
DNA (1236bp) protein (412aa)
phosphoglycerate dehydrogenase-like oxidoreductase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AGG88211.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AGG88211.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanth
D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNR2_9GAMM
SCNpilot_BF_INOC_scaffold_221_138
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155466..156857
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036393A7
FAD-linked oxidase {ECO:0000313|EMBL:KFA29620.1}; TaxID=1094180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola p
FAD/FMN-dependent dehydrogenase
SCNpilot_BF_INOC_scaffold_221_139
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156944..157390
DNA (447bp) protein (149aa)
Thioredoxin 2 n=4 Tax=Xanthomonas campestris RepID=G0CHV9_XANCA
Thioredoxin {ECO:0000313|EMBL:KGM57764.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS
thioredoxin
SCNpilot_BF_INOC_scaffold_221_140
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157558..157896)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6AD14
Uncharacterized protein {ECO:0000313|EMBL:KFN41006.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
putative Fe-S oxidoreductase
SCNpilot_BF_INOC_scaffold_221_141
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158082..159143
DNA (1062bp) protein (354aa)
RIO-like kinase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWG1_PSEUU
RIO-like kinase
RIO-like kinase {ECO:0000313|EMBL:ADV28438.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas su
SCNpilot_BF_INOC_scaffold_221_142
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(159237..160106)
DNA (870bp) protein (290aa)
glutamine cyclotransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glutamine cyclotransferase id=12554526 bin=CNBR_ACIDO species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glutamine cyclotransferase
SCNpilot_BF_INOC_scaffold_221_143
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160285..160386)
DNA (102bp) protein (34aa)
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_BF_INOC_scaffold_221_144
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160535..161290
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00035D3588
Uncharacterized protein {ECO:0000313|EMBL:KGM57761.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenici
hypothetical protein
SCNpilot_BF_INOC_scaffold_221_145
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161306..164782)
DNA (3477bp) protein (1159aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; Flags: Precursor;; TaxID=666685 sp
transcription-repair coupling factor n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B5627
transcription-repair coupling factor Mfd
SCNpilot_BF_INOC_scaffold_221_146
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164842..165537)
DNA (696bp) protein (232aa)
Sortase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM93_9GAMM
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGI77862.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrim
sortase-like acyltransferase
SCNpilot_BF_INOC_scaffold_221_147
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165543..166634)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364D200
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KJV37094.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Lutei
ADP-heptose:LPS heptosyltransferase
SCNpilot_BF_INOC_scaffold_221_148
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166805..167545
DNA (741bp) protein (247aa)
3-deoxy-D-manno-octulosonic acid kinase {ECO:0000256|HAMAP-Rule:MF_00521}; Short=Kdo kinase {ECO:0000256|HAMAP-Rule:MF_00521};; EC=2.7.1.166 {ECO:0000256|HAMAP-Rule:MF_00521};; TaxID=1162282 species="
3-deoxy-D-manno-octulosonic acid kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VYA0_9GAMM
3-deoxy-D-manno-octulosonic acid kinase
SCNpilot_BF_INOC_scaffold_221_149
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167542..168312
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372795E
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
beta-lactamase
SCNpilot_BF_INOC_scaffold_221_150
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168312..169355
DNA (1044bp) protein (348aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036923E1
moaA; molybdenum cofactor biosynthesis protein a
Displaying items 121-150 of 238 in total

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