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SCNpilot_BF_INOC_scaffold_221_145

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(161306..164782)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; Flags: Precursor;; TaxID=666685 sp similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 999.99
  • Bit_score: 1701
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B5627 similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 999.99
  • Bit_score: 1726
  • Evalue 0.0
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 999.99
  • Bit_score: 1701
  • Evalue 0.0

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3477
ATGACCCATACCGCACTGATCCACTCCAGCCTGCCGAGCAGCCCCAAACAGCGCCGGCAATGGAACACGCCGCACGGCTCGGCGCTGGCGCTCGCCCTGGCTGAAGCCGGGAGTCGCCATCCCGGCCTCGTCGTCGTGGTCACCCGCGATACGCACGCCGCGCATGCGCTGGAATCGGAGATTGCGATATTTGCCGGCGACGGCCTCGAAGTGCTGCAGTTTCCGGATTGGGAAACCCTGCCCTACGACCTGTTTGCGCCGCACCCGGACATTGTTTCGCAACGCGTCTCGACCCTGCACCGATTGCCGGGACTTGGCCGCGGCGTGCTGGTCGTGCCGATCGCGACGCTGATGCAGCGCCTGGCGCCGCGCAGCTTCATCACCGGCTCGGGCCTGGTCCTTGCAGGCGGCCAGCATTTCGACCTCGCCGCCGAACAGCGGCGCTTGTCCGCAGCGGGTTACCGCAACGTGCCCCAGGTGCAGGAGCCCGGCGATTTTGCCGTGCGTGGTGCCATCGTCGATATCTACCCGACCGGCAGCGGCGTTCCGTATCGCATCGAATTGTTCGACGAGGAAGTCGATTCAATCCGCACCTTCGATCCGGAAACGCAGCGCTCGGCCAGCAAGGTCGATCATGTGCGCCTGTTGCCGGCGCGCGAATTCCCCTTGACCGAGGAGACCGCGAAGGATTTTCGCAACGCCCTGCGCGAACGATTCCCCATCGACCCGCGGCGTTGCCCGCTGTACCAGGACATCAAGGAAGGCACGGCGCCGGCCGGCATCGAGTACTACCTGCCGATGTTCTTCGCGCAAAGCCTGTACGGCGCGACCGAAACCCTGTTCGACTATCTCGCCGACGGTGCCTTGTTTGTCGTCTGTGACGGCGCCCTCGACGCCGCCGAACAATTTTCGCGGCAGACCCATGAACGCCACGAGCAACGCGCCCATGACGTCGAGCGGCCGATCCTGCCGGTATCCGAGCTGTATCTTTCCACGGAGCAATTGCGCGAGCGGCTGAACCAGCAGTTGCGCATCGACCTGGTCGCTGCGGGCTCGGATGAACGCGCCGTCGACCTCGGCACGCAGCCGGTTCCCTCCGTGCCGATCAATCGCAAGGACGAAACACCAGTCGCCGAATTGCAGCGCTTTGTCGCCAGCTACCCGGGTCGCGTCCTGATTGCCACCGAATCGGCCGGCCGGCGCGAAGCCCTCATCGAGCAGATCGGCGCAGCCGGCATGGCGCTGGCCACGGTCGCCTCGTGGCGCGAGTTCGTCGATGCGGATCCGCCGGTCCGATTCGCCATCACCGTCGCCGCGCTGGAACAGGGTTTTGCCGTCGTCAAACCCGCCATCAGCGTGCTCACCGAGCGCGAACTGCTCGGCGAACGTGCCCAGCAGAGTCGCCGCCGCAAGCGCGTCGCCCGTGATCCGGAAGCGGTGATCCGCGACTTGACCGAATTGGCCATCGGCGCGCCGATCGTGCATGTCGATCATGGCGTCGGCCGTTACCAGGGCTTGCTCAAGCTCGACGTGGGCGGTGCCGATGGCGAGTTCCTGGCCATCGAATACGCCAAGGGCGACAAGTTGTACGTGCCGGTTGCACAACTGCACCTGGTAAGTCGCTACTCGGGCACGGCGCCGGAACTTGCGCCCTTGCATTCGCTCGGCGGCGAAGCCTGGGATCGGGCCAAGCGCCGCGCCGCCGAGAAGGTGCGCGATGTCGCCGCCGAGCTGCTGGCGATCTATGCGCAGCGCGAGGCGCGTGCTGGCACCGCGCTGGCCATCGATCGGCTGATGTACGAGCAGTTCGCCTCGGCATTCCCGTTCGAGGAGACCCCGGACCAGTTGCAGGCGATCGAAGCCGTGATCGGCGACCTCGCCCGCACGCGGCCAATGGATCGCGTGGTCTGTGGCGACGTCGGCTTCGGCAAGACCGAGGTTGCCCTGCGCGCGGCCTTTGTCACCGCGGTATCCGGCAAGCAGGTCGGCATGCTGGCGCCGACCACCCTGCTCGCCCAGCAGCACTACCAGAATTTCCGCGACCGCCTGGCCGATTGGCCGATCCGCGTGGAAGTGCTGTCGCGCTTCAAGTCGAAGAAGGAAACCAGCGAGATCCTGGCCAAGCTTGCCGAAGGCCAGATCGACATCATCATCGGCACGCACAAGCTGCTGCAGGCGGACGTGAAGTTCAAGGACCTCGGCCTGCTCATCGTCGACGAGGAACAGCGTTTTGGCGTGCGCCAGAAGGAACAACTGAAAAAGCTGCGCGCAGAAGTCGATCTGCTCACGCTGACGGCGACGCCGATTCCACGCACCTTGAACATGGCCATGGCCGGACTGCGTGACCTGTCCATCATCGCCACGCCACCGGCGCATCGCCTCGCCGTGAAGACCTTCATCGGCCATTGGGATCCGGCCTTGATACGCGAGGCGTTCCAGCGCGAACTGCAACGTGGCGGCCAGGTCTATTTCCTGCACAACGAGGTCGAGACGATCGAGAAGACCGCACGCGAGCTCGAAGCCCTGGTGCCTGATGCGCGTGTGCGCATCGCCCACGGGCAGATGCCCGAGCGCGAGCTGGAACAGGTCATGCTCGATTTCTACCGCCAGCGCTTCAACGTGATGGTCTGCACCACGATCATCGAATCGGGCATCGACGTGCCGAGCGCGAACACCATCGTCATCAATCGCGCCGACAAGTTCGGCCTCGCCCAGTTGCACCAGTTGCGCGGTCGCGTCGGCCGCTCGCATCACCGCGCCTATGCCTTCCTCATCGTGCCGGACGCCCGTTCGATCACTGCCGATGCCGAAAAGCGACTCGAAGCGTTGGCCTCGCTGGAAGACCTTGGCGCGGGCTTCACGCTGGCCACGCACGATCTGGAAATCCGCGGGGCCGGCGAATTGCTTGGCGAGGAGCAATCCGGGCAGATCGAGGAAGTCGGCTTCTCGATGTATCGCGACATGCTCGATCGTGCAGTGCGTGCGCTGAAATCCGGCAAGGTTCCCGATTTCGACCTGACCAGCGAACATGAGGCCGAAATTGCCTTGCATGTCGCCGCGCTGATTCCGGATGACTACCTGGCCGACGTCAATGCGCGCCTGACCCTGTACAAGCGCATCTCCAGCGCAGCGGACGAGGATGCCCTGCGCGATCTGCAGGTGGAGATGGTCGATCGCTTCGGCCTGCTGCCCGATCAGGTGAAGAACCTGTTTGCGCTCACCGAGCTCAAGTTGCTGGCGACGCCCCTTGGCATACGCAAGCTCGAACTCGGCGCCAACGGCGGGCGCGTGCTCTTCAATGCGAAACCGAACATCGATCCGCTGACCGTGATCCGCATGATCCAGACCCTGCCCAAGGTCTACGCGCTGGATGGCCAGGACAAACTGAAGATCAAGCTCCAGCTCGAAGGCACCAGCGAGCGCATGCGCGTGGCCCGCGAGATCATCGTCGCGCTGTCGAAACGCAGCGCGGCTTGA
PROTEIN sequence
Length: 1159
MTHTALIHSSLPSSPKQRRQWNTPHGSALALALAEAGSRHPGLVVVVTRDTHAAHALESEIAIFAGDGLEVLQFPDWETLPYDLFAPHPDIVSQRVSTLHRLPGLGRGVLVVPIATLMQRLAPRSFITGSGLVLAGGQHFDLAAEQRRLSAAGYRNVPQVQEPGDFAVRGAIVDIYPTGSGVPYRIELFDEEVDSIRTFDPETQRSASKVDHVRLLPAREFPLTEETAKDFRNALRERFPIDPRRCPLYQDIKEGTAPAGIEYYLPMFFAQSLYGATETLFDYLADGALFVVCDGALDAAEQFSRQTHERHEQRAHDVERPILPVSELYLSTEQLRERLNQQLRIDLVAAGSDERAVDLGTQPVPSVPINRKDETPVAELQRFVASYPGRVLIATESAGRREALIEQIGAAGMALATVASWREFVDADPPVRFAITVAALEQGFAVVKPAISVLTERELLGERAQQSRRRKRVARDPEAVIRDLTELAIGAPIVHVDHGVGRYQGLLKLDVGGADGEFLAIEYAKGDKLYVPVAQLHLVSRYSGTAPELAPLHSLGGEAWDRAKRRAAEKVRDVAAELLAIYAQREARAGTALAIDRLMYEQFASAFPFEETPDQLQAIEAVIGDLARTRPMDRVVCGDVGFGKTEVALRAAFVTAVSGKQVGMLAPTTLLAQQHYQNFRDRLADWPIRVEVLSRFKSKKETSEILAKLAEGQIDIIIGTHKLLQADVKFKDLGLLIVDEEQRFGVRQKEQLKKLRAEVDLLTLTATPIPRTLNMAMAGLRDLSIIATPPAHRLAVKTFIGHWDPALIREAFQRELQRGGQVYFLHNEVETIEKTARELEALVPDARVRIAHGQMPERELEQVMLDFYRQRFNVMVCTTIIESGIDVPSANTIVINRADKFGLAQLHQLRGRVGRSHHRAYAFLIVPDARSITADAEKRLEALASLEDLGAGFTLATHDLEIRGAGELLGEEQSGQIEEVGFSMYRDMLDRAVRALKSGKVPDFDLTSEHEAEIALHVAALIPDDYLADVNARLTLYKRISSAADEDALRDLQVEMVDRFGLLPDQVKNLFALTELKLLATPLGIRKLELGANGGRVLFNAKPNIDPLTVIRMIQTLPKVYALDGQDKLKIKLQLEGTSERMRVAREIIVALSKRSAA*