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SCNpilot_BF_INOC_scaffold_239

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_239_31
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40744..41109)
DNA (366bp) protein (122aa)
Type IV pilus response regulator PilH n=1 Tax=mine drainage metagenome RepID=T1B5H2_9ZZZZ
Chemotaxis protein CheY {ECO:0000313|EMBL:GAN45287.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
chemotaxis protein CheY
SCNpilot_BF_INOC_scaffold_239_32
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41149..41547)
DNA (399bp) protein (133aa)
Response regulator receiver protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQ98_PSEUP
Pilus assembly protein PilG {ECO:0000313|EMBL:GAN45288.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakii
response regulator receiver protein
SCNpilot_BF_INOC_scaffold_239_33
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41869..42816
DNA (948bp) protein (316aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:
glutathione synthetase n=1 Tax=Dyella japonica RepID=UPI00037B3E66
glutathione synthetase
SCNpilot_BF_INOC_scaffold_239_34
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42813..43676
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E00F7C
Energy transducer TonB {ECO:0000313|EMBL:GAN45290.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacte
energy transducer TonB
SCNpilot_BF_INOC_scaffold_239_35
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43729..44292
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037433A8
UPF0301 protein MBSD_1837 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
putative transcriptional regulator
SCNpilot_BF_INOC_scaffold_239_36
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44311..44763
DNA (453bp) protein (151aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1475481 speci
Resolvase, holliday junction-type, YqgF-like protein n=1 Tax=mine drainage metagenome RepID=T1D8G6_9ZZZZ
Holliday junction resolvase
SCNpilot_BF_INOC_scaffold_239_37

Not on your lists

44760..45752
DNA (993bp) protein (331aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase catalytic subunit n=1 Tax=mine drainage metagenome RepID=T1CEU3_9ZZZZ
Aspartate carbamoyltransferase catalytic subunit {ECO:0000313|EMBL:EQD65365.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_BF_INOC_scaffold_239_38
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45775..47454
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C1A9D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47194.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_239_39
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47466..49019)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Nocardiopsis chromatogenes RepID=UPI00034CA3B4
Methyltransferase {ECO:0000313|EMBL:EWM66995.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
type 11 methyltransferase
SCNpilot_BF_INOC_scaffold_239_40
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49055..50185)
DNA (1131bp) protein (377aa)
twitching motility protein PilT n=1 Tax=Dyella japonica RepID=UPI0002F580EE
Twitching motility protein PilT {ECO:0000313|EMBL:GAN45294.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizug
twitching motility protein PilT
SCNpilot_BF_INOC_scaffold_239_41
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50405..51988)
DNA (1584bp) protein (528aa)
FAD dependent oxidoreductase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0ST10_XANCT
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AKC87708.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudox
FAD-dependent oxidoreductase
SCNpilot_BF_INOC_scaffold_239_42
unknown

Not on your lists

comp(52021..54195)
DNA (2175bp) protein (725aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_239_43
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54251..55582)
DNA (1332bp) protein (444aa)
Major facilitator family transporter n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQX7_STIAD
major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:ADO72010.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;
SCNpilot_BF_INOC_scaffold_239_44
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55733..56722
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365C393
Bile acid:sodium symporter {ECO:0000313|EMBL:KGK58353.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp
membrane protein
SCNpilot_BF_INOC_scaffold_239_45
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56719..57624)
DNA (906bp) protein (302aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
protoheme IX farnesyltransferase (EC:2.5.1.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380591E
SCNpilot_BF_INOC_scaffold_239_46
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57731..58282)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ83_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI76682.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
SCNpilot_BF_INOC_scaffold_239_47
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58279..58974)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036BDDF8
Uncharacterized protein {ECO:0000313|EMBL:GAN45539.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_239_48
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59071..59274
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000366FD6C
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_239_49
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59376..60248)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003702BF3
heme/copper-type cytochrome/quinol oxidase, subunit 3
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_239_50
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60280..60858)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371569D
Cysteine ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAN45542.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibact
cox11; cytochrome C oxidase assembly protein
SCNpilot_BF_INOC_scaffold_239_51
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61045..62664)
DNA (1620bp) protein (540aa)
Cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W313_9GAMM
Cytochrome oxidase subunit I {ECO:0000313|EMBL:KGI76686.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimo
cytochrome oxidase subunit I
SCNpilot_BF_INOC_scaffold_239_52
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62695..63579)
DNA (885bp) protein (295aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xant
cytochrome C oxidase subunit II n=1 Tax=Dyella ginsengisoli RepID=UPI0003450C5B
cytochrome C oxidase subunit II
SCNpilot_BF_INOC_scaffold_239_53
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63750..67061
DNA (3312bp) protein (1104aa)
pyrroline-5-carboxylate dehydrogenase n=1 Tax=Dyella japonica RepID=UPI0002E268A8
Integrase {ECO:0000313|EMBL:KJV31881.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
integrase
SCNpilot_BF_INOC_scaffold_239_54
unknown

Not on your lists

67345..67671
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_239_55
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67711..70833)
DNA (3123bp) protein (1041aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFA5_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL98146.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
cation/multidrug efflux pump
SCNpilot_BF_INOC_scaffold_239_56
unknown

Not on your lists

comp(70830..71864)
DNA (1035bp) protein (345aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_239_57
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71861..75091)
DNA (3231bp) protein (1077aa)
acriflavine resistance protein B n=1 Tax=Dyella ginsengisoli RepID=UPI00034C2180
Acriflavin resistance protein {ECO:0000313|EMBL:EIL88001.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
acriflavine resistance protein B
SCNpilot_BF_INOC_scaffold_239_58
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75195..76394)
DNA (1200bp) protein (400aa)
Membrane fusion protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLB1_9GAMM
Membrane protein {ECO:0000313|EMBL:GAN45269.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
RND family efflux transporter, MFP subunit
SCNpilot_BF_INOC_scaffold_239_59
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76658..76882)
DNA (225bp) protein (75aa)
formate dehydrogenase subunit delta (EC:1.2.1.2)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003487841
Formate dehydrogenase subunit delta {ECO:0000313|EMBL:KGI79015.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Ole
SCNpilot_BF_INOC_scaffold_239_60
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77037..78224)
DNA (1188bp) protein (396aa)
General substrate transporter:Major facilitator superfamily MFS_1 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HU8_DECAR
MFS transporter {ECO:0000313|EMBL:KGM55828.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH
major facilitator transporter
Displaying items 31-60 of 60 in total

View Taxonomy