ggKbase home page

SCNpilot_BF_INOC_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_239_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3..575)
DNA (573bp) protein (191aa)
Proprotein convertase P n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GEQ1_LACS5
hypothetical protein Tax=RBG_16_Ignavibacteria_34_14_curated
protrotein convertase P
SCNpilot_BF_INOC_scaffold_239_2
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(850..1851)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363EED3
Uncharacterized protein {ECO:0000313|EMBL:KFN43290.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
thiamine monophosphate synthase
SCNpilot_BF_INOC_scaffold_239_3
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1867..4599)
DNA (2733bp) protein (911aa)
Protein translocase subunit SecA n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQQ6_PSEUU
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
secA; preprotein translocase subunit SecA
SCNpilot_BF_INOC_scaffold_239_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4737..5678)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BCEFB
Exported peptidase-like enzyme {ECO:0000313|EMBL:EIL95896.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
peptidase M23
SCNpilot_BF_INOC_scaffold_239_5
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6239..7150)
DNA (912bp) protein (304aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003782758
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
SCNpilot_BF_INOC_scaffold_239_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7499..8683)
DNA (1185bp) protein (395aa)
peptidase M23 n=1 Tax=Dyella ginsengisoli RepID=UPI000345DE35
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dy
SCNpilot_BF_INOC_scaffold_239_7
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8864..10093)
DNA (1230bp) protein (410aa)
cell division protein FtsA n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D2DFD
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
cell division protein FtsA
SCNpilot_BF_INOC_scaffold_239_8
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10090..10947)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371E699
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lut
cell division septal protein
SCNpilot_BF_INOC_scaffold_239_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10944..11903)
DNA (960bp) protein (320aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8U8_9GAMM
SCNpilot_BF_INOC_scaffold_239_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11900..13339)
DNA (1440bp) protein (480aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
murC; UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVG0_9GAMM
SCNpilot_BF_INOC_scaffold_239_11
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13336..14403)
DNA (1068bp) protein (356aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036AF3AF
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
SCNpilot_BF_INOC_scaffold_239_12
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14400..15617)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003664ACC
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; X
cell division protein FtsW
SCNpilot_BF_INOC_scaffold_239_13
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15617..16699)
DNA (1083bp) protein (361aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003603DD4
phospho-N-acetylmuramoyl-pentapeptide-transferase
SCNpilot_BF_INOC_scaffold_239_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16689..18059)
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteoba
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CC60F
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
SCNpilot_BF_INOC_scaffold_239_15
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18053..19534)
DNA (1482bp) protein (494aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037C0F69
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
SCNpilot_BF_INOC_scaffold_239_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19531..21309)
DNA (1779bp) protein (593aa)
cell division protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4B255
Cell division protein {ECO:0000313|EMBL:GAN45818.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter
cell division protein
SCNpilot_BF_INOC_scaffold_239_17
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21453..21722)
DNA (270bp) protein (90aa)
cell division protein FtsL; K03586 cell division protein FtsL Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
ftsL; cell division protein ftsl
Cell division protein FtsL id=2892321 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
SCNpilot_BF_INOC_scaffold_239_18
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21719..22642)
DNA (924bp) protein (308aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037C7A8F
S-adenosyl-methyltransferase MraW
SCNpilot_BF_INOC_scaffold_239_19
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22656..23102)
DNA (447bp) protein (149aa)
cell division protein MraZ n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B54357
cell division protein MraZ
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_239_20
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23352..24350)
DNA (999bp) protein (333aa)
Type II secretion system protein K n=1 Tax=Beggiatoa alba B18LD RepID=I3CJX0_9GAMM
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_239_21
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24347..25054)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AU22_PSERE
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_239_22
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25051..25422)
DNA (372bp) protein (124aa)
General secretion pathway protein I n=1 Tax=Beggiatoa alba B18LD RepID=I3CHA3_9GAMM
general secretion pathway protein I
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_239_23
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25419..26048)
DNA (630bp) protein (210aa)
Ral secretory pathway protein H n=1 Tax=Salinisphaera shabanensis E1L3A RepID=F7QDC4_9GAMM
Ral secretory pathway protein H {ECO:0000313|EMBL:ERJ17920.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salin
general secretion pathway protein GspH
SCNpilot_BF_INOC_scaffold_239_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26451..28178
DNA (1728bp) protein (576aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJS9_9GAMM
adenosylmethionine-8-amino-7-oxononanoate transaminase
SCNpilot_BF_INOC_scaffold_239_25
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28270..28953
DNA (684bp) protein (228aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xa
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361FF0E
16S rRNA methyltransferase
SCNpilot_BF_INOC_scaffold_239_26
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28961..29431)
DNA (471bp) protein (157aa)
chemotaxis protein CheW n=1 Tax=Dyella japonica RepID=UPI0002DF84B3
Chemotaxis protein CheW {ECO:0000313|EMBL:GAN45983.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
chemotaxis protein CheW
SCNpilot_BF_INOC_scaffold_239_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29439..31409)
DNA (1971bp) protein (657aa)
CheB methylesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV62_9GAMM
CheB methylesterase {ECO:0000313|EMBL:EIL91103.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spath
hypothetical protein
SCNpilot_BF_INOC_scaffold_239_28
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31402..37806)
DNA (6405bp) protein (2135aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003455B0B
Chemotaxis protein CheA {ECO:0000313|EMBL:KGI78629.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
chemotaxis protein CheA
SCNpilot_BF_INOC_scaffold_239_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38061..40115)
DNA (2055bp) protein (685aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=mine drainage metagenome RepID=T1B5T6_9ZZZZ
Chemotaxis protein {ECO:0000313|EMBL:GAN45285.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter se
methyl-accepting chemotaxis protein
SCNpilot_BF_INOC_scaffold_239_30
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40179..40733)
DNA (555bp) protein (185aa)
Chemotaxis protein CheW {ECO:0000313|EMBL:GAN45286.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
Chemotaxis signal transduction protein id=2704647 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
chemotaxis protein CheW
Displaying items 1-30 of 60 in total

View Taxonomy