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SCNpilot_BF_INOC_scaffold_25

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Displaying items 1-30 of 251 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_25_1
unknown

Not on your lists

3..602
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_25_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(701..3355)
DNA (2655bp) protein (885aa)
Aminopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW27_9GAMM
Aminopeptidase {ECO:0000313|EMBL:EIL91418.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphyl
aminopeptidase N
SCNpilot_BF_INOC_scaffold_25_3
unknown

Not on your lists

3707..4309
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_25_4
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4403..5116)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DDE3_9GAMM
NODE_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96402.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
hypothetical protein
SCNpilot_BF_INOC_scaffold_25_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5174..5833)
DNA (660bp) protein (220aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRQ7_9GAMM
SCNpilot_BF_INOC_scaffold_25_6
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5836..6360)
DNA (525bp) protein (175aa)
NODE_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96400.1}; EC=1.8.4.12 {ECO:0000313|EMBL:KIQ96400.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGP8_9PROT
methionine-R-sulfoxide reductase
SCNpilot_BF_INOC_scaffold_25_7
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6654..8117)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003605253
Uncharacterized protein {ECO:0000313|EMBL:EYR69320.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
SCNpilot_BF_INOC_scaffold_25_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8234..9664)
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DC86B
deoxyribodipyrimidine photolyase
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AHX13045.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangn
SCNpilot_BF_INOC_scaffold_25_9
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9794..14782
DNA (4989bp) protein (1663aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000371ADAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC45623.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchar
SCNpilot_BF_INOC_scaffold_25_10
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14860..15342)
DNA (483bp) protein (161aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
slyD; peptidylprolyl isomerase, FKBP-type (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5DDF5
SCNpilot_BF_INOC_scaffold_25_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15548..16171)
DNA (624bp) protein (208aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.6.1.31 3.5.4.19)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rhodanobacter denitrificans RepID=M4NEY1_9GAMM
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
SCNpilot_BF_INOC_scaffold_25_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16168..16938)
DNA (771bp) protein (257aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH4_9GAMM
imidazole glycerol phosphate synthase
SCNpilot_BF_INOC_scaffold_25_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16932..17657)
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D9160
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
SCNpilot_BF_INOC_scaffold_25_14

Not on your lists

comp(17654..18253)
DNA (600bp) protein (200aa)
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=mine drainage metagenome RepID=T1BZ71_9ZZZZ
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000313|EMBL:EQD58334.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.
SCNpilot_BF_INOC_scaffold_25_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18250..19317)
DNA (1068bp) protein (356aa)
imidazoleglycerol-phosphate dehydratase (EC:3.1.3.15 4.2.1.19)
Imidazole glycerol-phosphate dehydratase/histidinol phosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRG3_9GAMM
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" sou
SCNpilot_BF_INOC_scaffold_25_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19314..20393)
DNA (1080bp) protein (360aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=2 Tax=mine drainage metagenome RepID=T0YR63_9ZZZZ
SCNpilot_BF_INOC_scaffold_25_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20390..21697)
DNA (1308bp) protein (436aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W689_9GAMM
SCNpilot_BF_INOC_scaffold_25_18

Not on your lists

comp(21694..22593)
DNA (900bp) protein (300aa)
ATP phosphoribosyltransferase n=1 Tax=mine drainage metagenome RepID=T1CG24_9ZZZZ
ATP phosphoribosyltransferase {ECO:0000313|EMBL:EQD70443.1}; Protein containing ATP phosphoribosyltransferase, catalytic region {ECO:0000313|EMBL:EQD80748.1}; TaxID=410659 species="unclassified sequen
ATP phosphoribosyltransferase
SCNpilot_BF_INOC_scaffold_25_19

Not on your lists

comp(22590..22970)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1AGB3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD59536.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
TrpR
SCNpilot_BF_INOC_scaffold_25_20
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23288..24940)
DNA (1653bp) protein (551aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EYR67178.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
sulfite reductase, alpha subunit (flavoprotein)
SCNpilot_BF_INOC_scaffold_25_21
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24937..26001)
DNA (1065bp) protein (355aa)
thiamine biosynthesis lipoprotein ApbE n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6DA11
Uncharacterized protein {ECO:0000313|EMBL:KFN43846.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
thiamine biosynthesis protein ApbE
SCNpilot_BF_INOC_scaffold_25_22
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26001..26810)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SXC2_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CCP40692.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas trans
ABC-type Co2+ transport system, periplasmic component
SCNpilot_BF_INOC_scaffold_25_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26826..27335)
DNA (510bp) protein (170aa)
Periplasmic protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJH8_9GAMM
Periplasmic protein {ECO:0000313|EMBL:EIL87369.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvu
hypothetical protein
SCNpilot_BF_INOC_scaffold_25_24
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27346..27972)
DNA (627bp) protein (209aa)
PepSY domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XFG7_9BURK
PepSY domain protein {ECO:0000313|EMBL:EFF74392.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaud
PepSY-associated TM helix family protein 7
SCNpilot_BF_INOC_scaffold_25_25
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28132..28659)
DNA (528bp) protein (176aa)
N-acetyltransferase GCN5 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B640B3
Uncharacterized protein {ECO:0000313|EMBL:KFN45066.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
GCN5-like N-acetyltransferase
SCNpilot_BF_INOC_scaffold_25_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28669..29916)
DNA (1248bp) protein (416aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1163409 species="Bacteria; Proteo
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003654728
SCNpilot_BF_INOC_scaffold_25_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29913..31244)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E070C1
Fe-S cluster assembly protein SufD
Fe-S cluster assembly protein SufD {ECO:0000313|EMBL:AHX12352.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jian
SCNpilot_BF_INOC_scaffold_25_28
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31244..32005)
DNA (762bp) protein (254aa)
transporter n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EC5AB
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
FeS assembly ATPase SufC
SCNpilot_BF_INOC_scaffold_25_29
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32107..33594)
DNA (1488bp) protein (496aa)
cysteine desulfurase activator complex subunit SufB n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F1ACB
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:KFN41842.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;
FeS assembly protein SufB
SCNpilot_BF_INOC_scaffold_25_30
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33606..34052)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003734CA6
Rrf2 family transcriptional regulator
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:AHX12348.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
Displaying items 1-30 of 251 in total

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