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SCNpilot_BF_INOC_scaffold_3948

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3948_1
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(305..550)
DNA (246bp) protein (82aa)
Type IV secretory pathway, VirB10 component n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C7K2_9XANT
Type IV secretory pathway, VirB10 component {ECO:0000313|EMBL:EGD18497.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source
conjugative transfer protein TrbI
SCNpilot_BF_INOC_scaffold_3948_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(666..2543)
DNA (1878bp) protein (626aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U8EFA0_PSEAI
hypothetical protein
SCNpilot_BF_INOC_scaffold_3948_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2540..4873)
DNA (2334bp) protein (778aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U8EGD7_PSEAI
ATP-dependent endonuclease {ECO:0000313|EMBL:AFU46904.1}; Uncharacterized protein {ECO:0000313|EMBL:BAJ72267.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
ATP-dependent endonuclease
SCNpilot_BF_INOC_scaffold_3948_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5110..5313
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVH0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ45774.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
SCNpilot_BF_INOC_scaffold_3948_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5323..6141)
DNA (819bp) protein (273aa)
Integrase catalytic region n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSZ2_PSEUU
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ADV27148.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxan
SCNpilot_BF_INOC_scaffold_3948_6
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6165..6428)
DNA (264bp) protein (88aa)
Putative is1404 transposase orf a protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UE12_XANAP
transposase
Transposase {ECO:0000313|EMBL:AJC47643.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_BF_INOC_scaffold_3948_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6506..7057
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVH0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46903.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_BF_INOC_scaffold_3948_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7066..7284)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LFE8_BURGS
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AIJ47725.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testostero
SCNpilot_BF_INOC_scaffold_3948_9
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7281..8555)
DNA (1275bp) protein (425aa)
Conjugation TrbI family protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WX59_PSEDE
conjugative transfer protein TrbI
Conjugal transfer protein TrbI {ECO:0000313|EMBL:KGM52051.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter
SCNpilot_BF_INOC_scaffold_3948_10
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8558..8785)
DNA (228bp) protein (76aa)
P-type conjugative transfer protein TrbG n=5 Tax=Proteobacteria RepID=C1MFC4_9ENTR
P-type conjugative transfer protein TrbG
p-type conjugative transfer protein trbg {ECO:0000313|EMBL:BAP44845.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
Displaying 10 items

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