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SCNpilot_BF_INOC_scaffold_1170_6

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7596..11756)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 999.99
  • Bit_score: 2324
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 999.99
  • Bit_score: 2324
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Rudaea cellulosilytica RepID=UPI000370045F similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 999.99
  • Bit_score: 2360
  • Evalue 0.0

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4161
ATGACCTACTCGTTCACTGAAAAGAAGCGCATCCGCAAGGATTTCGGCAAGCGTCCGCCCGTGCTGGACGTTCCCTTCCTGCTGGCCATCCAGGTCGATTCGTATCGCGAGTTCCTGCAACTCGAAGGCGATCCGAACAAACGTGAGGACAAGGGTCTGCACGCGGCCTTGCAGTCGGTGTTTCCGATTTCCAGCTACGCCGGCCATGCCGCACTCGAGTACGTCAGCTATCGCCTCGGCGAGCCCGCGTTCGACGAGCGCGAATGCCGCTCGCGTGGCATGTCCTACGGTGCGCCGCTGCGCGTGACCGTGCGCCTGGTCATCTACGATCGCGAATCGTCGAACAAGGCGATCAAGTACGTCAAGGAACAGGAAGTCTACATGGGCGAATTGCCGCTCATGACCGATACTGGCACCTTCATCGTCAATGGCACCGAGCGCGTCATCGTTTCCCAGTTGCATCGTTCGCCGGGCGTGTTCTTCGATCATGACCGCGGCAAGACGCATTCTTCGGGCAAGCTGCTGTACTCAGCCCGCGTGATTCCCTATCGCGGCTCGTGGCTCGATTTCGAATTCGATCCGAAGGATGCCCTGTTCACGCGCATCGACCGTCGCCGCAAGTTGCCGGTGACGATCCTGCTGCGCGCGCTGGGTTATACCAACGAGCAGATGCTCGACATCTTCTTCGAGCACAACGTCTTTCACCTTGGCAAGAAGGATGGCGCCGAGCTTGAGCTTGTTTCCGAGCGCCTGCGCGGTGAAACGCTCAACTTCGACCTGCGCATCGGCAAGGATGTCATCGTCGAGGCCGGCAAGCGCATCACTGCCCGCCACGTGCGCCAGCTTGAAAGCGCCAAGATCAAGTCGCTGGAAGTGCCCGACGAATACCTGATCGGCCGCATCCTTGCCAACGACATCGTCGACACGAAGACCGGCGAACTGCTCGCTTCGGCCAACGACGAGATCGACCAGACGCATGTCGAGGCTTTCCGCAAGGCCGGCATTGGTCGCATCGCTACCCTGTGGGTCAACGATCTCGATCGTGGCCCGTACATCTCGCAGACCCTGCGCATCGATCCCTCGAAGACGCCGTTGGAGGCGCTGGTCGAGATCTATCGCATGATGCGTCCCGGCGAACCGCCGACCAAGGATGCCGCGCAGAACCTGTTCCAGAACCTGTTCTTCTCGGCCGAGCGCTACGATCTCGATCGCGTCGGTCGCATGAAGTTCAATCGCCGAGTCGGGCGCAAGGACGACAATGGTCCGGGCGTGCTGTACGACGGGCGCTATTTCCGTGATCGCAACGACGAAACCTCGAAGGCGATGGTCAAGGAGCTTGGCGCAGGTTCGGACATTCTCGACGTGCTCAAGGTACTCATCGACATCCGCAATGGTCGCGGCACGGTCGATGACATCGACCACCTCGGCAACCGTCGCGTCCGCTCTGTCGGCGAGATGGCCGAGAACGTGTTCCGCATCGGCCTTGTGCGCGTCGAGCGTGCGGTCAAGGAGCGCCTGTCGCTGGCCGAGTCGGAAGGCCTGACGCCGCAGGAACTGATCAACGCCAAGCCGGTGGCTGCCGCGATCAAGGAGTTCTTCGGCTCCTCGCAGCTTTCGCAGTTCATGGACCAGAACAATCCGCTTTCGGAAGTCACCCACAAGCGCCGCGTCTCCGCACTCGGCCCGGGTGGCCTGACCCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACCCGACCCATTACGGCCGCGTCTGCACGATCGAAACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTCGCCGTCTATGCGCGCACGAACGGCTACGGCTTCCTCGAGACGCCGTACCGCAAGGTCGCCAAGGGCAAGATCACCAATGAGGTCGAATTCCTTTCGGCAATCGACGAAGGCGATCACGTCATTGCCCAGGCGAACTCGCCGCTGAGCAAGGATGGCGCCTTTACCGAGGAGTTCGTTTCCTGCCGCTCGCACGGTGAATCGGAATTGCGCCCGCCCAGCGACGTCGAATACATGGACGTCTCGCCGATGCAGACTGTTTCGGTTGCTGCCGCACTCGTGCCCTTCCTCGAGCATGATGACGCCAACCGCGCCCTCATGGGCGCGAACATGCAGCGCCAGGCCGTGCCGACCCTGCGTGCGCAGACCCCGGTTGTCGGTACCGGCATCGAGCGCGCCGTGGCGCGCGACTCGGGCGTGATCGTGGCAGCGCGTCGTGGCGGCGAGATCGACCAGGTCGATGCCGCGCGCATCGTCGTGCGTGTGCGCGAGGACCAGATTGGCGAGAACGACGCCGGTGTCGACATCTACCCGTTGACCAAGTACACCCGTTCAAACCAGAACACCAACCTCAACCAGCGTCCGCTGGTCAATGTCGGCGACAAGGTCGAGATTGGCGATGTGCTGGCGGACGGCCCGTCGACCGATCTCGGCGAACTGGCTCTTGGCCAGAACATGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGATCCTGATCTCGGAGCGCGTCGTCCAGGAGGACCGCTACACGACAATCCATATCGAGGAGCTGACCTGCGTCGCCCGCGACACCAAGCTCGGGCCGGAGGAAATCACCGCCGATATCCCGAACGTCGGCGAGCAGGCGTTGGCCCGACTCGACGAGTCCGGCGTGGTCTACATCGGTGCCGAAGTGAAGGCCGGCGACATCCTCGTCGGCAAGGTCACGCCGAAGGGCGAAAGCCAGCTCACCCCGGAAGAAAAGCTCCTGCGCGCGATCTTCGGCGAGAAGGCTTCCGATGTGAAGGACAGCTCGCTGCGCGTGCCGCCCGGCATGGACGGCACGGTCATCGACGTCACCGTGTTCACCCGCGATGGCATCGAGAAGGACAAGCGTGCGCGGCAGATCGAAGAGATGGAAATCAAGCGCATCAAGAAGGACTTCGACGATCAGTTCCGCATCCTTGAAGGCGCCATCTACAACCGCCTGCGCAGCAGCATCCTCGGCAAGACCGTCAATGGCGGCCCTGGTGGCATCAAGAAGGGCGCGACGCTGAATGATGAGTACCTCGACAGCCTCAAGCGCGACGAGTGGTTCTCGATCCGCATGAAGGACGAGGATGCCGCCGAGATGCTCGAGCGCGCCCAGGAACAGATCAAGGGCCACCGCGAGGAGTTCGACCGTCGCTTCAAGGAGAAGCAGGCGAAGATCACCGCCGGCGACGATCTCGCCCCCGGCGTGCTGAAGATGGTCAAGGTCTATCTGGCCGTCAAGCGCCGCATCCAGCCCGGCGACAAGATGGCCGGACGCCATGGCAACAAAGGTGTCGTCTCGATGATCGTTCCGGTCGAGGACATGCCCTACGCCGCCGATGGCCGCCCGGTCGATATCGTGCTCAACCCGCTCGGCGTGCCCTCGCGCATGAACATCGGCCAGATTCTCGAGACCCATCTCGGCTGGGCCGCGAAGGGCCTTGGCGAGAAGATCGGCAAGATGCTCGATGCCAACGAGAAGGTCGGCGAATTGCGCAAGTTCCTCGACGCGATCTACAACCACGACAAGGACAGTTTCAAGCAGCGCGTTGACCTCAAGTCCTTCAGTGATGACGAACTGCTGGCGATGGCGCGCAACCTGCGTACCGGCGTGCCGATGGCAACTCCGGTGTTCGATGGTGCGTTCGAGTCCGAGATCAAGGCCATGCTCAAGCTGGCCGGTCTGCCGGAATCAGGCCAGACCATTCTCATCGATGGACGCACGGGCGAGTCGTTCGATCGCCCGGTCACCGTCGGTTACATGCACATGCTCAAGCTCAACCACCTGGTCGACGACAAGATGCACGCCCGCTCCACGGGTCCGTACTCGCTGGTCACCCAGCAGCCACTCGGCGGCAAGGCCCAGTTCGGCGGACAGCGCTTCGGCGAAATGGAAGTCTGGGCACTGGAAGCTTACGGCGCCGCCTACACGCTGCAGGAAATGCTCACGGTCAAGTCCGATGACGTTTCCGGGCGCAACCAGATGTACAAGAACATCGTCGACGGCGACCACGAGATGGTGGCGGGCATGCCGGAGTCGTTCAACGTATTGGTCAAGGAAATCCGTTCGCTCGCGATCAACATCGAGCTGGACGAGATCAAGTCCAAGTGA
PROTEIN sequence
Length: 1387
MTYSFTEKKRIRKDFGKRPPVLDVPFLLAIQVDSYREFLQLEGDPNKREDKGLHAALQSVFPISSYAGHAALEYVSYRLGEPAFDERECRSRGMSYGAPLRVTVRLVIYDRESSNKAIKYVKEQEVYMGELPLMTDTGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARVIPYRGSWLDFEFDPKDALFTRIDRRRKLPVTILLRALGYTNEQMLDIFFEHNVFHLGKKDGAELELVSERLRGETLNFDLRIGKDVIVEAGKRITARHVRQLESAKIKSLEVPDEYLIGRILANDIVDTKTGELLASANDEIDQTHVEAFRKAGIGRIATLWVNDLDRGPYISQTLRIDPSKTPLEALVEIYRMMRPGEPPTKDAAQNLFQNLFFSAERYDLDRVGRMKFNRRVGRKDDNGPGVLYDGRYFRDRNDETSKAMVKELGAGSDILDVLKVLIDIRNGRGTVDDIDHLGNRRVRSVGEMAENVFRIGLVRVERAVKERLSLAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVYARTNGYGFLETPYRKVAKGKITNEVEFLSAIDEGDHVIAQANSPLSKDGAFTEEFVSCRSHGESELRPPSDVEYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRAQTPVVGTGIERAVARDSGVIVAARRGGEIDQVDAARIVVRVREDQIGENDAGVDIYPLTKYTRSNQNTNLNQRPLVNVGDKVEIGDVLADGPSTDLGELALGQNMLVAFMPWNGYNFEDSILISERVVQEDRYTTIHIEELTCVARDTKLGPEEITADIPNVGEQALARLDESGVVYIGAEVKAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVTVFTRDGIEKDKRARQIEEMEIKRIKKDFDDQFRILEGAIYNRLRSSILGKTVNGGPGGIKKGATLNDEYLDSLKRDEWFSIRMKDEDAAEMLERAQEQIKGHREEFDRRFKEKQAKITAGDDLAPGVLKMVKVYLAVKRRIQPGDKMAGRHGNKGVVSMIVPVEDMPYAADGRPVDIVLNPLGVPSRMNIGQILETHLGWAAKGLGEKIGKMLDANEKVGELRKFLDAIYNHDKDSFKQRVDLKSFSDDELLAMARNLRTGVPMATPVFDGAFESEIKAMLKLAGLPESGQTILIDGRTGESFDRPVTVGYMHMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGRNQMYKNIVDGDHEMVAGMPESFNVLVKEIRSLAINIELDEIKSK*