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SCNpilot_BF_INOC_scaffold_206_74

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(77957..78487)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 175.0
  • Bit_score: 285
  • Evalue 4.60e-74
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL92011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 175.0
  • Bit_score: 285
  • Evalue 6.40e-74
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 176.0
  • Bit_score: 279
  • Evalue 7.00e-73

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGCAAATGGTCGCCGTGGCAACACAACGCGATCGCACCAGCTTCATGCGCATCTACGATCATTTCGCCCCACGCCTGCGGTGCTACCTTGGCAGTCTGGGCATGCAAGATTCGATGGCCGACGAGCTTGTTCAGGAAGCGCTGCTGACCTTGTGGCGAAAGGCCGGGATGTTTGATCCGAGCCGCGCCAGCCTCGCCACCTGGCTGTTTCGCGTGGCGCGCAATCTGTACATTGACCACGTCCGCCAGCAACCCGAATGGCTGCCGATCCAGAAAGGCCTGGAACGGCTGGAAGAAGCGGAATTCGGTCGACCGGATTCGCAACCCGAATCGTTCTTCGACCAGGACATCCTGAAACAGGCCATCGATCGCCTTCCGCCGGTGCAGGCCAAACTGATACGCATGTGCTACCTCGAGAGCAGGAGCCACAGCGAGATCTCCGACGAACTGCAAATGCCGCTGGGTTCGGTGAAATCTTCACTGCGGCGCGCGTTTTCAAAACTCCAGGGCAGCATGAGGGCCTCGCGATGA
PROTEIN sequence
Length: 177
MQMVAVATQRDRTSFMRIYDHFAPRLRCYLGSLGMQDSMADELVQEALLTLWRKAGMFDPSRASLATWLFRVARNLYIDHVRQQPEWLPIQKGLERLEEAEFGRPDSQPESFFDQDILKQAIDRLPPVQAKLIRMCYLESRSHSEISDELQMPLGSVKSSLRRAFSKLQGSMRASR*