ggKbase home page

SCNpilot_BF_INOC_scaffold_221_76

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 87350..89323

Top 3 Functional Annotations

Value Algorithm Source
Putative Outer membrane autotransporter barrel domain protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4STQ9_META2 similarity UNIREF
DB: UNIREF100
  • Identity: 27.6
  • Coverage: 399.0
  • Bit_score: 144
  • Evalue 4.70e-31
Uncharacterized protein {ECO:0000313|EMBL:KHD08357.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg similarity UNIPROT
DB: UniProtKB
  • Identity: 26.2
  • Coverage: 596.0
  • Bit_score: 161
  • Evalue 3.00e-36
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 399.0
  • Bit_score: 144
  • Evalue 1.30e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Thiomargarita nelsonii → Thiomargarita → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1974
ATGATCATTTCGCGCGGGAAGTCGTGGTCTGGCAACATTCCTGCCGCCGCGTTGGTGATCCTGCTGGCCTTGCCGGTTCCGGCCCTGGCCATGCAGGAGCTGGTGGTTGTGCGCCATAACGGCCAGACCAGCAGCCATGTCGCGAAATCGGGGGCTGCCGCAGCGGGCGTCGCCGCCTGTGCCGACCCAGCGGTTGCCTTTGCCTTCATGGTCGAACCGCATGACGGCATGACCACTGTGCAGTTGCAGCGTGGAGCCGATGTCTCGCGCGACATCGTCCTCGATGTGACCCTGACGTGTTCGACCCTGGAGGGTTCCGCGCTGGTGCCGTTCGATGCCGCCGGCGGAACCGCGTCGAATGGATCCGACTACGTCTCGACGCCGGGCATGGCGCTGCTGACCCTGACCCACAGCGACCAGGGCGGCGTGTCGACCCCGGTTCCGGCCATCGTCCACATCGAACTTCTCGACAATGGCCAGAACGCCGGGCAGACGCGCACGCTCAACATCGTGCGTACCGAGGGCTCTTTCCAGGGGACCTCGGCGCAGGGGCAGCCGATTGTCGGCACGATCCCCGGAAGCACAACGGCAATTGTTGCAATCACCATCCTTGCCCAGACAACGATCGACGATGGCTCGGATGTCGTGCCCGGGCTGGATCCGGGAGCGGGTGACGTCAGCAACGCGGCCACCCGGTTCTGTGCCGACCAGGGCGGTGGATCGGGATCGACGGGATGCCTCGCCACGCAGGTGGCCGCCAACCTTGTCGCGGATCCGAACACCCCTGCCAGCGTGCGCGAAAACGCCACGGCAGTGCTGGAGAACAATCTCCTCGCCATTTCCCCGGATGAAACCACGGCGTTGGCGTTTGTCGCGCCGCTGCTTGCCACGGGTCAATTCGACAACCTTGCTGAACGCCTGTCCGAACTGCGTACTGGCAATCTCGGCGGAACCGTCAGTGCCGGTGGACTGACTTTTGTCCACAATGGACTGCCCTTTTCGCTGGCCAGTCTGGGCACATCGCTGAATGTCGATGACGACGAATCCGCACGCAATGAGGAAAAGCGCACGCTGCTTGGCGGAACGCGTCTCGGACTCTGGGTCAATGGCACGATCGGTGGCAGCGAAACGGATCGTCGTGGCGGCAATTCCGGTTTCAAATCCGACAACTGGAACCTCACCAGCGGGCTTGATTACCGCTTCAGCGATCGCTTCTTCGCCGGTGCCGCAATTGGCTATTCAAGCCTCACCAGCGATTACGCAAACGACCAGGGATCGCTCGATGCCGACTCCAAGTCGTTGCATGTCTATTCCGGCTATGCGCTGACCAGTGGTTTCAGTCTCGATGGATCGGTCAGTTACATGCGCAGCGACTACACGCAGAAACGCGTGATCGAGCTGTATGCCTTGAATGCCGGGGGTACCGGATACAGTTCGCTGGGACGCGACATTGCCGTGGGCAAGCCGCGGGTGACGCAGACGGGAGCGAATTTCGGCGTGACCTACACCTTCATGCGCGGCAGCTGGACCATTGCGCCACAGGCACAGATCTCGGTCCTGCATAACACCTATGACGCATTCAGCGAGCGCGGCCCCTCCGCATTCAACCTGAGCTTCGACGAGCGCAAGAGCAACAGCACGTCGTTTTCCGCGGGCGGTTATGTCGACCGCACGTTTGCCACCTCGGTCGGTGCTTTCCGCCCCTATGTCCGCGCCTATTATTTTGCCGACAGCGGCTCGTCGAGTGACCTGCTGAGCCGGTTTGTGCGCAACGACGCCGATGGCAGCGCAACTCCCATCGCATTGTCGATGCAGGAGCCGGACCGCCGCTATGGAACCGCGGAACTCGGACTTGGTTTCAGTCGGCCGATTGGGACGCGCACGGTGGATTTCAGCGCCGGATACATGAAGACCTTCAGCTTCCAGGACCTCGATCGATGGGCACTGCGGTTCGACATGCGGATACCGCTTTGA
PROTEIN sequence
Length: 658
MIISRGKSWSGNIPAAALVILLALPVPALAMQELVVVRHNGQTSSHVAKSGAAAAGVAACADPAVAFAFMVEPHDGMTTVQLQRGADVSRDIVLDVTLTCSTLEGSALVPFDAAGGTASNGSDYVSTPGMALLTLTHSDQGGVSTPVPAIVHIELLDNGQNAGQTRTLNIVRTEGSFQGTSAQGQPIVGTIPGSTTAIVAITILAQTTIDDGSDVVPGLDPGAGDVSNAATRFCADQGGGSGSTGCLATQVAANLVADPNTPASVRENATAVLENNLLAISPDETTALAFVAPLLATGQFDNLAERLSELRTGNLGGTVSAGGLTFVHNGLPFSLASLGTSLNVDDDESARNEEKRTLLGGTRLGLWVNGTIGGSETDRRGGNSGFKSDNWNLTSGLDYRFSDRFFAGAAIGYSSLTSDYANDQGSLDADSKSLHVYSGYALTSGFSLDGSVSYMRSDYTQKRVIELYALNAGGTGYSSLGRDIAVGKPRVTQTGANFGVTYTFMRGSWTIAPQAQISVLHNTYDAFSERGPSAFNLSFDERKSNSTSFSAGGYVDRTFATSVGAFRPYVRAYYFADSGSSSDLLSRFVRNDADGSATPIALSMQEPDRRYGTAELGLGFSRPIGTRTVDFSAGYMKTFSFQDLDRWALRFDMRIPL*