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SCNpilot_BF_INOC_scaffold_385_3

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1109..1498)

Top 3 Functional Annotations

Value Algorithm Source
NODE_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96230.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 123.0
  • Bit_score: 178
  • Evalue 4.70e-42
C4-type zinc finger DksA/TraR family protein id=12495667 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 125.0
  • Bit_score: 134
  • Evalue 5.60e-29
transcriptional regulators, TraR/DksA family protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 125.0
  • Bit_score: 125
  • Evalue 9.50e-27

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Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGACCACACTGACCCACACCGAGCGCGAGCACCTCACCAGCACGCTGGATCAGCGTGAGCAAGTGTTGCGCGATGAAATCCGCGCCGGGCTCACCCGCATGCGCGTTGAAGGCTATGAAGATCTGTTGTCAGGCGCCTCGGATGCGGGCGATGAATCGCTGGCCTCGCTGATCACCGACATCACCAACGCGGAGGTCGTGCGCGACGCAACCGAGCTGAAGGACATTTTTGCCGCCAAGGCCCGCCTTGCGGCAAGCAACTATGGCGTGTGCATCGATTGCGGCGCCCCGATACCCTACGCGCGCCTGGTCGCCTATCCAACTGCCAAGCGCTGCCTCGCCTGCCAACAGGCCCACGAAGAAAAGCGGAACCCTGCGCGACGCGGCTGA
PROTEIN sequence
Length: 130
MTTLTHTEREHLTSTLDQREQVLRDEIRAGLTRMRVEGYEDLLSGASDAGDESLASLITDITNAEVVRDATELKDIFAAKARLAASNYGVCIDCGAPIPYARLVAYPTAKRCLACQQAHEEKRNPARRG*