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SCNpilot_BF_INOC_scaffold_385

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_385_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_385_2
unknown

Not on your lists

comp(181..879)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_385_3
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1109..1498)
DNA (390bp) protein (130aa)
NODE_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96230.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
C4-type zinc finger DksA/TraR family protein id=12495667 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transcriptional regulators, TraR/DksA family protein
SCNpilot_BF_INOC_scaffold_385_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1614..1874)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KP52_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH12841.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
SCNpilot_BF_INOC_scaffold_385_5
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1874..3181)
DNA (1308bp) protein (436aa)
Putative membrane protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZDA4_XANCT
Membrane protein {ECO:0000313|EMBL:KGM51840.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis K
hypothetical protein
SCNpilot_BF_INOC_scaffold_385_6
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3208..4359)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX27_9GAMM
Virion core protein (Lumpy skin disease virus) {ECO:0000313|EMBL:KGM51839.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" sou
hypothetical protein
SCNpilot_BF_INOC_scaffold_385_7
unknown

Not on your lists

comp(4514..5110)
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_385_8
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5524..5874
DNA (351bp) protein (117aa)
amidohydrolase (EC:3.5.1.32)
Amidohydrolase n=4 Tax=Ralstonia RepID=B2U9L7_RALPJ
Amidohydrolase {ECO:0000313|EMBL:KGO99630.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB A
SCNpilot_BF_INOC_scaffold_385_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6197..7030)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QGH0_SHELP
Uncharacterized protein {ECO:0000313|EMBL:KGJ99327.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_385_10
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7281..7955
DNA (675bp) protein (225aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; X
SOS-response repressor and protease LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4Y159_ALCXX
SCNpilot_BF_INOC_scaffold_385_11
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8111..8851
DNA (741bp) protein (247aa)
Cell division inhibitor SulA n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HSW6_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:KJV33196.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
hypothetical protein
SCNpilot_BF_INOC_scaffold_385_12
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8830..10074)
DNA (1245bp) protein (415aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E10EF
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
SCNpilot_BF_INOC_scaffold_385_13

Not on your lists

comp(10302..12080)
DNA (1779bp) protein (593aa)
Uncharacterized protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1A6Z0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD36654.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_385_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12152..14311)
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BD6D9
Acetyl-CoA hydrolase {ECO:0000313|EMBL:KGI77441.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli
acetyl-CoA hydrolase/transferase family protein
SCNpilot_BF_INOC_scaffold_385_15

Not on your lists

14426..16834
DNA (2409bp) protein (803aa)
Cyclic nucleotide-binding protein n=1 Tax=uncultured bacterium W4-39b RepID=H9BWS4_9BACT
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AFD03246.1}; TaxID=1130994 species="Bacteria; environmental samples.;" source="uncultured bacterium W4-39b.;"
cyclic nucleotide-binding protein
SCNpilot_BF_INOC_scaffold_385_16

Not on your lists

16929..17834
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00037D88AF
Putative uncharacterized protein {ECO:0000313|EMBL:AFD03247.1}; TaxID=1130994 species="Bacteria; environmental samples.;" source="uncultured bacterium W4-39b.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_385_17
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17894..19573
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI000372FE2B
Cytochrome C family protein {ECO:0000313|EMBL:KFG88278.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
cytochrome C family protein
SCNpilot_BF_INOC_scaffold_385_18
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19648..21675
DNA (2028bp) protein (676aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00036C7F0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCU74050.1}; TaxID=1298593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans MIL-
SCNpilot_BF_INOC_scaffold_385_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21677..23500
DNA (1824bp) protein (608aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IIF9_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_385_20
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23517..27329
DNA (3813bp) protein (1271aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00038162D9
LVIVD {ECO:0000313|EMBL:EDM83000.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
LVIVD
SCNpilot_BF_INOC_scaffold_385_21
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27341..27823
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CK45_9LEPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ95810.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
SCNpilot_BF_INOC_scaffold_385_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27870..29345
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5T9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38283.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_BF_INOC_scaffold_385_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29462..30823
DNA (1362bp) protein (454aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEY6_9GAMM
exodeoxyribonuclease VII large subunit
SCNpilot_BF_INOC_scaffold_385_24
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30966..32606
DNA (1641bp) protein (547aa)
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T252_BURPP
acetolactate synthase
Thiamine pyrophosphate protein domain protein TPP-binding {ECO:0000313|EMBL:ACD15663.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkhold
SCNpilot_BF_INOC_scaffold_385_25
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32671..34107
DNA (1437bp) protein (479aa)
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABB12422.1}; EC=1.2.1.3 {ECO:0000313|EMBL:ABB12422.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
aldehyde dehydrogenase n=1 Tax=Burkholderia kururiensis RepID=UPI000345E3E5
aldehyde dehydrogenase family protein
SCNpilot_BF_INOC_scaffold_385_26
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34153..35406)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EC758
amino acid dehydrogenase
Amino acid dehydrogenase {ECO:0000313|EMBL:AHX12445.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis
SCNpilot_BF_INOC_scaffold_385_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35697..36008
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI77631.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
SCNpilot_BF_INOC_scaffold_385_28
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36102..36599
DNA (498bp) protein (166aa)
Lipoprotein n=4 Tax=Xanthomonas campestris RepID=Q4UWH2_XANC8
NLP/P60 protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hydrolase Nlp/P60
SCNpilot_BF_INOC_scaffold_385_29
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36630..37118)
DNA (489bp) protein (163aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F9E7F
peptidylprolyl isomerase
SCNpilot_BF_INOC_scaffold_385_30
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37194..37724)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E46EF
Uncharacterized protein {ECO:0000313|EMBL:KFN47762.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
hypothetical protein
Displaying items 1-30 of 81 in total

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