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SCNpilot_BF_INOC_scaffold_3085

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3085_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..881)
DNA (879bp) protein (293aa)
cbbM; ribulose bisphosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase; Short=RuBisCO;; EC=4.1.1.39;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thio
Ribulose bisphosphate carboxylase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RBL2_THIDA
SCNpilot_BF_INOC_scaffold_3085_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1024..1935
DNA (912bp) protein (304aa)
Rubisco operon transcriptional regulator id=1366900 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cbbR2; transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
cbbR2; transcriptional regulator
SCNpilot_BF_INOC_scaffold_3085_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1954..4080)
DNA (2127bp) protein (709aa)
Probable high affinity sulfate transporter (SulP) id=1366899 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
high affinity sulfate transporter SulP Tax=GWE1_Thiobacillus_62_9_curated
high affinity sulfate transporter SulP
SCNpilot_BF_INOC_scaffold_3085_4
unknown

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comp(4289..4474)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3085_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4471..5109)
DNA (639bp) protein (213aa)
Partition protein A id=1372697 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
partition protein A; K03496 chromosome partitioning protein Tax=GWE1_Thiobacillus_62_9_curated
partition protein A
SCNpilot_BF_INOC_scaffold_3085_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5114..5383)
DNA (270bp) protein (90aa)
Putative uncharacterized protein id=1372696 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3085_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5376..5819)
DNA (444bp) protein (148aa)
Bacterioferritin id=1372695 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
bacterioferritin; K03594 bacterioferritin Tax=GWE1_Thiobacillus_62_9_curated
bacterioferritin
SCNpilot_BF_INOC_scaffold_3085_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5842..6216)
DNA (375bp) protein (125aa)
Carboxysome structural peptide CsoS1B id=1372694 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
carboxysome structural peptide CsoS1B Tax=GWE1_Thiobacillus_62_9_curated
carboxysome structural peptide CsoS1B
SCNpilot_BF_INOC_scaffold_3085_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6229..6528)
DNA (300bp) protein (100aa)
Carboxysome shell protein CsoS1A n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFK8_THIDA
carboxysome shell protein CsoS1A
Carboxysome shell protein CsoS1A {ECO:0000313|EMBL:AAZ98598.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiob
SCNpilot_BF_INOC_scaffold_3085_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6579..6878)
DNA (300bp) protein (100aa)
Carboxysome shell protein, CsoS1C n=3 Tax=Thiobacillus RepID=Q3SES1_THIDA
carboxysome shell protein, CsoS1C
Carboxysome shell protein, CsoS1C {ECO:0000313|EMBL:AAZ98599.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thio
SCNpilot_BF_INOC_scaffold_3085_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6891..7181)
DNA (291bp) protein (97aa)
Carboxysome protein B id=1372691 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
carboxysome protein B Tax=GWE1_Thiobacillus_62_9_curated
carboxysome protein B
SCNpilot_BF_INOC_scaffold_3085_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7183..7290)
DNA (108bp) protein (36aa)
Carboxysome protein A id=1372690 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
carboxysome protein A Tax=GWE1_Thiobacillus_62_9_curated
carboxysome protein A
Displaying 12 items

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