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SCNpilot_BF_INOC_scaffold_3590

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3590_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1155)
-----------------
DNA (1155bp)
protein (385aa)
RNA helicase n=1 Tax=Thiobacillus thioparus RepID=UPI000369E785
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AAZ98768.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus de
SCNpilot_BF_INOC_scaffold_3590_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1486..3252)
-----------------
DNA (1767bp)
protein (589aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003693BC8
ABC transporter ATPase; K06148 ATP-binding cassette, subfamily C, bacterial Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter ATPase
SCNpilot_BF_INOC_scaffold_3590_3
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3345..4031)
-----------------
DNA (687bp)
protein (229aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361C58F
Putative Cytochrome b/b6 domain {ECO:0000313|EMBL:CDI01509.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus
cytochrome B561
SCNpilot_BF_INOC_scaffold_3590_4
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4028..4504)
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003809975
Class II cytochrome c {ECO:0000313|EMBL:KDB51345.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM
class II cytochrome c
SCNpilot_BF_INOC_scaffold_3590_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4645..5865)
-----------------
DNA (1221bp)
protein (407aa)
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DC008
tRNA modification GTPase TrmE
SCNpilot_BF_INOC_scaffold_3590_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5957..7600)
-----------------
DNA (1644bp)
protein (548aa)
insertase n=1 Tax=Thiobacillus thioparus RepID=UPI0003760FD0
protein translocase subunit YidC; K03217 preprotein translocase subunit YidC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
protein translocase subunit yidC
SCNpilot_BF_INOC_scaffold_3590_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7612..8205)
-----------------
DNA (594bp)
protein (198aa)
ribonuclease P protein component (EC:3.1.26.5); K03536 ribonuclease P protein component [EC:3.1.26.5] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ribonuclease P protein component (EC:3.1.26.5)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9350
SCNpilot_BF_INOC_scaffold_3590_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8870..9709
-----------------
DNA (840bp)
protein (280aa)
chromosomal replication initiator protein DnaA n=1 Tax=Thiobacillus denitrificans RepID=UPI00036210E3
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=GWE1_Thiobacillus_62_9_curated
chromosome replication initiator DnaA
SCNpilot_BF_INOC_scaffold_3590_9
unknown

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comp(9895..10311)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3590_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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10525..10929
-----------------
DNA (405bp)
protein (135aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI000370F794
SCNpilot_BF_INOC_scaffold_3590_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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11057..11308
-----------------
DNA (252bp)
protein (84aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=GWE1_Thiobacillus_62_9_curated
DNA gyrase subunit B id=1307779 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_BF_INOC_scaffold_3590_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11248..12867
-----------------
DNA (1620bp)
protein (540aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=GWE1_Thiobacillus_62_9_curated
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=1307779 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Displaying 12 items

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