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SCNpilot_BF_INOC_scaffold_1053

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1053_1
unknown

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comp(3..182)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1053_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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254..1354
-----------------
DNA (1101bp)
protein (367aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EEC97775.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EEC97775.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae;
Antioxidant, AhpC/TSA family n=2 Tax=Parabacteroides johnsonii RepID=B7B701_9PORP
hypothetical protein
SCNpilot_BF_INOC_scaffold_1053_3
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1388..2926
-----------------
DNA (1539bp)
protein (513aa)
Mg chelatase-like protein n=3 Tax=Parabacteroides RepID=K6A278_9PORP
Mg chelatase-like protein {ECO:0000313|EMBL:KKB46629.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp.
magnesium chelatase subunit ChlI
SCNpilot_BF_INOC_scaffold_1053_4
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3058..5097
-----------------
DNA (2040bp)
protein (680aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Parabacteroides merdae RepID=A7AHG4_9PORP
SCNpilot_BF_INOC_scaffold_1053_5
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5312..5617
-----------------
DNA (306bp)
protein (102aa)
ArsR Family Transcriptional Regulator n=1 Tax=Bacteroidales bacterium CF RepID=U5QAY0_9BACT
hypothetical protein
ArsR Family Transcriptional Regulator {ECO:0000313|EMBL:AGY54459.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
SCNpilot_BF_INOC_scaffold_1053_6
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

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5674..5910
-----------------
DNA (237bp)
protein (79aa)
Redox-active disulfide protein 2 id=2047598 bin=GWE2_Bacteroidetes_40_15 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
SCNpilot_BF_INOC_scaffold_1053_7
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5917..6330
-----------------
DNA (414bp)
protein (138aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5E3_PALPW
Uncharacterized protein {ECO:0000313|EMBL:GAO28464.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.
hypothetical protein
SCNpilot_BF_INOC_scaffold_1053_8
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6340..7035
-----------------
DNA (696bp)
protein (232aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5E4_PALPW
Cytochrome c biogenesis protein {ECO:0000313|EMBL:GAO28465.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JC
cytochrome c biogenesis protein transmembrane region
SCNpilot_BF_INOC_scaffold_1053_9
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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7087..8409
-----------------
DNA (1323bp)
protein (441aa)
hypothetical protein AnHS1_03756 id=4133003 bin=GWF2_Bacteroidetes_39_10 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
permease
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_BF_INOC_scaffold_1053_10
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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8393..9490
-----------------
DNA (1098bp)
protein (366aa)
hypothetical protein
hypothetical protein AnHS1_03751 id=1891429 bin=GWE2_Bacteroidetes_42_39 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein AnHS1_03751 Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_BF_INOC_scaffold_1053_11
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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9502..9876
-----------------
DNA (375bp)
protein (125aa)
DGC domain protein id=1856255 bin=GWD2_Bacteroidetes_33_33 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1053_12
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10034..10357
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6AUA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN19308.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
transcriptional regulator
SCNpilot_BF_INOC_scaffold_1053_13
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10429..10884
-----------------
DNA (456bp)
protein (152aa)
Arsenate reductase (EC:1.20.4.1)
Arsenate reductase {ECO:0000313|EMBL:GAK35711.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 1998
proteiN-tyrosine phosphatase, low molecular weight id=2995575 bin=GWF2_Bacteroidetes_35_48 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
SCNpilot_BF_INOC_scaffold_1053_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10904..11953
-----------------
DNA (1050bp)
protein (350aa)
Arsenical-resistance protein n=2 Tax=Bacteroides fragilis RepID=I9K6A0_BACFG
Arsenical-resistance protein {ECO:0000313|EMBL:EIZ00654.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T
arsenical-resistance protein
SCNpilot_BF_INOC_scaffold_1053_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12041..13009
-----------------
DNA (969bp)
protein (323aa)
Predicted permeases n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ95_9BACT
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBK65107.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
SCNpilot_BF_INOC_scaffold_1053_16
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13091..13894)
-----------------
DNA (804bp)
protein (268aa)
Putative metallo-beta-lactamase superfamily hydrolase n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JL22_9PORP
Putative metallo-beta-lactamase superfamily hydrolase {ECO:0000313|EMBL:CDE64273.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; en
metallo-beta-lactamase domain-containing protein
SCNpilot_BF_INOC_scaffold_1053_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13898..14476)
-----------------
DNA (579bp)
protein (193aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" so
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L4N4_BACV8
hypothetical protein
SCNpilot_BF_INOC_scaffold_1053_18
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14427..15959)
-----------------
DNA (1533bp)
protein (511aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" so
Uncharacterized protein n=2 Tax=Bacteroides RepID=D1JXE5_9BACE
helicase
SCNpilot_BF_INOC_scaffold_1053_19
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16501..18150
-----------------
DNA (1650bp)
protein (550aa)
Probable sulfate permease n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XTQ1_FLAIG
sulfate permease
Tax=BJP_IG2102_Flavobacteriales_34_12
SCNpilot_BF_INOC_scaffold_1053_20
unknown

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18216..18410
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1053_21
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20226..20804
-----------------
DNA (579bp)
protein (193aa)
Rubrerythrin n=3 Tax=Parabacteroides RepID=K6A3T3_9PORP
Rubrerythrin {ECO:0000313|EMBL:KKB58063.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
rubrerythrin
SCNpilot_BF_INOC_scaffold_1053_22
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20872..22455)
-----------------
DNA (1584bp)
protein (528aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroid
L-aspartate oxidase n=3 Tax=Bacteroides RepID=I9I0H6_9BACE
L-aspartate oxidase
SCNpilot_BF_INOC_scaffold_1053_23
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22617..24020
-----------------
DNA (1404bp)
protein (468aa)
Peptidase, S41 family n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PQ64_9BACE
Carboxyl-terminal protease {ECO:0000313|EMBL:GAK37723.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens
peptidase S41
SCNpilot_BF_INOC_scaffold_1053_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(24079..25614)
-----------------
DNA (1536bp)
protein (512aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0E2_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91876.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
SCNpilot_BF_INOC_scaffold_1053_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(25635..28904)
-----------------
DNA (3270bp)
protein (1090aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0E3_DYAFD
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT91877.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
TonB-dependent receptor plug
SCNpilot_BF_INOC_scaffold_1053_26
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28997..30349
-----------------
DNA (1353bp)
protein (451aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae
Dihydrolipoyl dehydrogenase n=3 Tax=Parabacteroides RepID=K6A434_9PORP
alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase
SCNpilot_BF_INOC_scaffold_1053_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30385..31143
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AH33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11978.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source=
hypothetical protein
SCNpilot_BF_INOC_scaffold_1053_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31134..31895
-----------------
DNA (762bp)
protein (254aa)
Uroporphyrinogen-III synthase n=7 Tax=Parabacteroides RepID=A7AH34_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11301.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnson
uroporphyrinogen-III synthase
SCNpilot_BF_INOC_scaffold_1053_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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31892..32278
-----------------
DNA (387bp)
protein (129aa)
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZJ64_9PORP
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
SCNpilot_BF_INOC_scaffold_1053_30
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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32275..32496
-----------------
DNA (222bp)
protein (74aa)
Putative membrane protein insertion efficiency factor n=3 Tax=Parabacteroides RepID=K6A3P8_9PORP
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porp
hypothetical protein
Displaying items 1-30 of 40 in total

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