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SCNpilot_BF_INOC_scaffold_1083

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1083_1
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11..2422)
DNA (2412bp) protein (804aa)
Putative TonB-dependent receptor exported protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JFE5_9PORP
Putative TonB-dependent receptor exported protein {ECO:0000313|EMBL:CDB48902.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; enviro
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_1083_2
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2688..3326
DNA (639bp) protein (213aa)
SagB-type dehydrogenase domain-containing protein n=3 Tax=Parabacteroides RepID=K5ZGR5_9PORP
SagB-type dehydrogenase domain-containing protein {ECO:0000313|EMBL:KKB52275.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sour
hypothetical protein
SCNpilot_BF_INOC_scaffold_1083_3
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3512..3916)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1185 RepID=R5MC25_9BACT
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHF11506.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
SCNpilot_BF_INOC_scaffold_1083_4
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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comp(4018..4419)
DNA (402bp) protein (134aa)
Uncharacterized protein id=3492738 bin=GWC1_Spirochaetes_27_15 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein Tax=GWD1_Spirochaetes_27_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1083_5
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4551..5249)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PA24_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ06721.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odo
hypothetical protein
SCNpilot_BF_INOC_scaffold_1083_6
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5324..7741)
DNA (2418bp) protein (806aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000364F546
TonB-dependent outer membrane receptor {ECO:0000313|EMBL:EWH14689.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellu
tonb-dependent receptor plug
SCNpilot_BF_INOC_scaffold_1083_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7934..9226)
DNA (1293bp) protein (431aa)
twp-component sensor histidine kinase n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559877
Uncharacterized protein {ECO:0000313|EMBL:KIC90283.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
putative two component sensor histidine kinase
SCNpilot_BF_INOC_scaffold_1083_8
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9236..9910)
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559878
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIM37533.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingob
SCNpilot_BF_INOC_scaffold_1083_9
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9938..11221)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AXJ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB51235.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HG
heat shock protein rbh
SCNpilot_BF_INOC_scaffold_1083_10
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11401..12585)
DNA (1185bp) protein (395aa)
MFS transporter n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B50DB1
Arabinose efflux permease
Arabinose efflux permease {ECO:0000313|EMBL:CBK74121.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.
SCNpilot_BF_INOC_scaffold_1083_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12598..12963)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Prevotella paludivivens RepID=UPI00036E1647
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1083_12
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12966..13343)
DNA (378bp) protein (126aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KM95_9BACE
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples
hypothetical protein
SCNpilot_BF_INOC_scaffold_1083_13
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13777..14220
DNA (444bp) protein (148aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X9E2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50869.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13
SCNpilot_BF_INOC_scaffold_1083_14
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14323..15702)
DNA (1380bp) protein (460aa)
DNA primase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YUH8_9PORP
DNA primase {ECO:0000313|EMBL:KKB54002.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
DNA primase
SCNpilot_BF_INOC_scaffold_1083_15
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15699..17093)
DNA (1395bp) protein (465aa)
replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Z9H2_9PORP
Replicative DNA helicase {ECO:0000313|EMBL:KKB51072.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. H
Displaying 15 items

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